Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1415 ATGAAGACAGCAGGGAGCATATTCCTAAGGACTCACTTCCCCACTCCAACTAAGCTCCTCTTCCTTCCTCTTACAAATCCCAAACACTCCCTCTCCCTAATTCCCATTTCCATATCCTTCACCCGCTTCTCATCCACCAATCCCAATCCAATCTTATACGGACCTTCCCTCCACAAAGGAACCGCTCCAACACTTCAACGCCCCCAAAACGATACCCTTCTCACCCTCCGTGAAGATGCCTTCACTCGCGTCTTCCACCTCTCTGCCCTCCGTGTCCCCTCCGCCCACTGCTCCGCCTTAGAGACTCGCCTCCGCGGCCACCTCCTCAACTGGCCTCGTGTTCGCAACATCGCTCGCGTCCCCGGTGATGACCTCGATCCCGACCTCGCTTCGCTAGTTACCTCCGGAGAATCAGGAGGAGGAGAAGAAGGACACGTGTCGTTGCAGCGATGGATTTACGGCCAAGCCGAGGGAGACGGCGACGTTTTGAGCCCGGTTCTGTACAGAGAGAAGCTCGCAAGGACGTTCAATACGCGTGGCTTCGTTGTTGAAGAGGACGATAATGGAGGGGGTATTTTGGGGAATTTGGTTGAGGAGGAGTTTGGGAGGGAGAAGTGGAGGGGCTCCACGAGGTTGCTGTTGCTGGATGAACGGTATGCCGGTCGCGGCGTCCAAGACTTGCCTGAGGCTATCAAGGTGGCCGTATTAAAGGAGTATGCCGAAAAGAGTGCAAATTTGACTTTTGAGCTAGTTAGGTGCAAATTGACTCTGTTTTATGATTATTGGCAGATGAATGAGATCCTAGAGGTCTTGCTACCTGATGGTGTGGTTGTTCCTTCAGCTTTTGAGACCGTTGGTCACATTGCACACCTGAATTTGAGAGAGGAACATTTACCATACAAAACACTCATAGCAAAGGTTGTGCTGGATAAAAATAAGCCAAAGATACAAACAGTTGTGAACAAGATTGATTCCATTCATAATGAATACATGACCATGCAGCTTGAGGTTCTAGCAGGAAACCACTCTCTAGTTACCACAGTTGTTGAGAACGGAATACGCTTTCAGGTTGACTTAGCAACAGTATACTGGAGTTCTAGGCTTGCAACTGAAAGACAAAGGCTTTTGAGTGTTGGTCCCTTGGCCATATCTGCAGCAAAGATAGTTAAGCATGTTTTCGCTAATGATTTAAACCCATTTGCAGTGGAGTATCTGGAAAGAAATAGTGTTCTAAACAAACTTGAAAGGAAGATTGAGGTCTTTAACATGGATGGGAGAAGGTTCATTAAGGCTATGTATGCCAGTGATAAAGCTCAATCAATCACGCAAGTGGTTATGAACTTGCCAAATGAAGCTGCAGAATTTCTAGATGCATTTAGGGGAATATACAAAGACAGACCCAAGGACACGGAATGCAACTTGCCAACGATCCATGTTTATGGATTCTCCAAAGCGCAAGATCCGGAATTTGATTTTCACGAGAGAATAAGAATTGCCCTGCTAGAGGTTGCAGTCGACGTAGAAATGCGACGTGTACGACTTGTGGCGCCTGGAAAATGGATGTTGTGTGCATCATTCGTTCTCCCTAGAAGTGTAGCATTTGCTAATACTGCAATTGATACTTAA 1626 0.4736 MKTAGSIFLRTHFPTPTKLLFLPLTNPKHSLSLIPISISFTRFSSTNPNPILYGPSLHKGTAPTLQRPQNDTLLTLREDAFTRVFHLSALRVPSAHCSALETRLRGHLLNWPRVRNIARVPGDDLDPDLASLVTSGESGGGEEGHVSLQRWIYGQAEGDGDVLSPVLYREKLARTFNTRGFVVEEDDNGGGILGNLVEEEFGREKWRGSTRLLLLDERYAGRGVQDLPEAIKVAVLKEYAEKSANLTFELVRCKLTLFYDYWQMNEILEVLLPDGVVVPSAFETVGHIAHLNLREEHLPYKTLIAKVVLDKNKPKIQTVVNKIDSIHNEYMTMQLEVLAGNHSLVTTVVENGIRFQVDLATVYWSSRLATERQRLLSVGPLAISAAKIVKHVFANDLNPFAVEYLERNSVLNKLERKIEVFNMDGRRFIKAMYASDKAQSITQVVMNLPNEAAEFLDAFRGIYKDRPKDTECNLPTIHVYGFSKAQDPEFDFHERIRIALLEVAVDVEMRRVRLVAPGKWMLCASFVLPRSVAFANTAIDT* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1415 541 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 282 530 IPR030382 -
Amo18g1415 541 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 73 530 IPR025792 GO:0009019|GO:0030488
Amo18g1415 541 PANTHER TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 198 538 - -
Amo18g1415 541 Pfam Met-10+ like-protein 281 466 IPR030382 -
Amo18g1415 541 Gene3D - 263 341 - -
Amo18g1415 541 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 278 530 IPR029063 -
Amo18g1415 541 PANTHER TRNA METHYLTRANSFERASE 198 538 - -
Amo18g1415 541 PANTHER TRNA METHYLTRANSFERASE 41 175 - -
Amo18g1415 541 PANTHER TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 41 175 - -
Amo18g1415 541 Gene3D Vaccinia Virus protein VP39 345 528 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1415 Amo-Chr18 26508647 26513451 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1415 K15429 - gmx:100797627 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1415 18 26508647 26513451 Amo18g1415 18 26508647 26513451 ECH