Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1300 ATGGCTGTCAAAGTTTATGTTGTGTACTACTCCATGTATGGACATGTTGAGAAGCTAGCACAAGAAATCAAGAAAGGCGCTGCTTCGGTAGAAGGCGTTGAGGTCAAAATATGGCAGGTGCCTGAGACACTGCCAGAAGAAGTGCTTGGTAAGATGGGTGCACCACCAAAGACCGATGCACCAATCATCACCGCCGACGAACTCGCCACGGCTGATGGTTTTGTCTTTGGCTTCCCTACTAGATTCGGGATGATGCCTGCTCAATTTAAGGCTTTCCTAGATTCCACCGGGGGTCTATGGAGGACACAGCAGCTTGCAGGCAAGCCTGCTGGAATCTTCTATAGCACTGGTTCCCAGGGTGGCGGACAAGAGACAACAGCGCTTACTGCTATCACTCAGCTTGTGCATCACGGAATGATATTCGTTCCGATCGGATACACATTTGGTGCCGGCATGTTTGAGATGGAGAARGTGAAAGGTGGAAGTCCATACGGGGCCGGAACTTATGCCGGTGACGGCTCAAGGCAGCCATCTCAGCTTGAGTTGGACCAAGCATTCCACCAAGGAAAGTACCTTGCATCCATCACAAAGAAGCTCAAGAAGGAACAAGCTGCATAA 618 0.5016 MAVKVYVVYYSMYGHVEKLAQEIKKGAASVEGVEVKIWQVPETLPEEVLGKMGAPPKTDAPIITADELATADGFVFGFPTRFGMMPAQFKAFLDSTGGLWRTQQLAGKPAGIFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTYAGDGSRQPSQLELDQAFHQGKYLASITKKLKKEQAA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1300 205 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1 1 201 - -
Amo18g1300 205 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 1 201 - -
Amo18g1300 205 SUPERFAMILY Flavoproteins 4 200 IPR029039 -
Amo18g1300 205 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
Amo18g1300 205 Gene3D - 1 201 IPR029039 -
Amo18g1300 205 ProSiteProfiles Flavodoxin-like domain profile. 5 192 IPR008254 GO:0010181
Amo18g1300 205 Pfam NADPH-dependent FMN reductase 17 144 IPR005025 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1300 Amo-Chr18 23293451 23297891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1300 K03809 - rcu:8259333 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1300 18 23293451 23297891 Amo18g1300 18 23293451 23297891 ECH
Amo18g1300 18 23293451 23297891 Amo08g1448 08 23726333 23730629 hybridization