Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1241 ATGTCTTTTTTAGCTTCGGTTCTAGTAATGCCTTCGACTCAACATGCCCCTTCTAACTTAAAGAGACCCTCTGTAAATTTTGCTCCTAGCATTTGGCATGACACTTTTCTGAAATATGTTGATTCCAAATTTTTGCAACAAGCTCAAAAGCTGAGAGAGGAAGTGAAGGTGCAGCTCTCTTCAAATAATGATATTTTACAAAAATTAAATATCATTGATTCAATTCAACGTTTAGATATATCTTATCATTTTGAACATGAAATTGAGAAAGCAATCAATCAAATCTACATTAACTTTACCAACAATAACTTCGTTATCCCAAAAGAGGGTGGAATTCACTTTTACGCATTACTCTTTCGTTTGCTCAGACAAAAAGGATATCAAATTTCATCAGATATATTTAACAAATTCAAGAACAGTGAAGGAAGATTCAAAGAAATAATTGCTCAAGATGTCAAAGGAATATGGAGTTTGTATGAGGCTGCACAATTGAGGGTTCATGAAGAAGCTATATTAGAGGAAGCAAATGATTTCACATACACTGAACTAAAGTCCATCACCAATCAGTTGAGTGAATCTCTTGCTGTGCAAATCAACCAGAGCTTAAAACAACCTCTTCACAAGGCAGTTCCAAGGATAGGGACAAGGTCATATATGTCTTTTTACGAAGAAGATCCTTATCATAACAAATCTCTGTTAACCTTTGCAAAATTAGATTTCAACATGCTACAGAAATTGCATCAAAATGAAGTTGGCGATATCACCAAAGAAAGAGTGGTTGAAGCATATTTTTGGCCATTAGCCATATCCTCTGATCCAAACTATAGCACTGCAAGAATGTTGATAACCAAATTGACTGTATGCATCTCTTTTCTTGATGATACTTATGATGCCTATGCTACACTTCAAGAACTTGAGCTCTTCACACAGGCAATCCAAAGGTGGGACATTAGTCCCATTAAATCTCTTCCGGAATGCATGAAAGTGGTATTTAATACAATTTTAGAAGTATGGAAGGAAATTGAGTCAGTGACTTCAAAGGATGAAAATTCAAGTTTGGTGTTACAACATATTAAACAAGAGTTTTTTAACTTGGCACAAGCCTACTTGGTTGAAGCAAAATGGTGCCATAGAGGCTATATTCCAACATATGATGAGTATAAGGTTAATGGAGCTATATCTTCTACCTTGCCACTTCAGATCATAGCTTTTCTTGGTTTGGCAGGATTTGCAACAAAAGAAGTGTTTGATTGGGTAATGAGTGATACGAAAATTGTAAAAGCTGTGTCACTTATTGGCAGACTCATGGATGATATGGCCTCACATAAGTTTGAGCAGCAAAGAGAACATGTTGCTTCTGCTGTTGAATGTTGTATGAAACAATACGATTTTTCTCAAGAAGAGGCCAATAAACTCATTCTAAAGGAGATCATAGATTATTGGAAGGATATAAACGAAGAATGTCTCAAATCAAATAATATCCCAAGACCTGTGCTTGATTCTATTGTTAATTTTGCCCGTATAATTGAGTTTACATACTCAAATTTTGAGGATAAATACACAAACACAGAACTGCTAAGAGAATATACTTAA 1593 0.3497 MSFLASVLVMPSTQHAPSNLKRPSVNFAPSIWHDTFLKYVDSKFLQQAQKLREEVKVQLSSNNDILQKLNIIDSIQRLDISYHFEHEIEKAINQIYINFTNNNFVIPKEGGIHFYALLFRLLRQKGYQISSDIFNKFKNSEGRFKEIIAQDVKGIWSLYEAAQLRVHEEAILEEANDFTYTELKSITNQLSESLAVQINQSLKQPLHKAVPRIGTRSYMSFYEEDPYHNKSLLTFAKLDFNMLQKLHQNEVGDITKERVVEAYFWPLAISSDPNYSTARMLITKLTVCISFLDDTYDAYATLQELELFTQAIQRWDISPIKSLPECMKVVFNTILEVWKEIESVTSKDENSSLVLQHIKQEFFNLAQAYLVEAKWCHRGYIPTYDEYKVNGAISSTLPLQIIAFLGLAGFATKEVFDWVMSDTKIVKAVSLIGRLMDDMASHKFEQQREHVASAVECCMKQYDFSQEEANKLILKEIIDYWKDINEECLKSNNIPRPVLDSIVNFARIIEFTYSNFEDKYTNTELLREYT* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1241 530 Pfam Terpene synthase family, metal binding domain 233 483 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo18g1241 530 SFLD Isoprenoid Synthase Type I 228 517 - -
Amo18g1241 530 SFLD Terpene Cyclase Like 1 C Terminal Domain 228 517 IPR034741 -
Amo18g1241 530 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 4 529 - -
Amo18g1241 530 Gene3D - 42 242 IPR036965 GO:0010333|GO:0016829
Amo18g1241 530 CDD Terpene_cyclase_plant_C1 22 524 IPR044814 GO:0010333|GO:0016102
Amo18g1241 530 Gene3D Farnesyl Diphosphate Synthase 243 529 IPR008949 -
Amo18g1241 530 SUPERFAMILY Terpenoid synthases 228 525 IPR008949 -
Amo18g1241 530 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 29 226 IPR008930 -
Amo18g1241 530 Pfam Terpene synthase, N-terminal domain 42 202 IPR001906 GO:0010333|GO:0016829
Amo18g1241 530 PANTHER OS04G0344100 PROTEIN-RELATED 4 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1241 Amo-Chr18 21917037 21928402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1241 K15803 - gmx:100781367 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1241 18 21917037 21928402 Amo18g1241 18 21917037 21928402 ECH