Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1220 ATGGAGTCAATACTAGCTCGTGCACTAGAGTACACGCTCAAGTATTGGCTCAAATCCTTCTCCAGAGAGCAGTTCAAGCTCCAAGGCCGCACTCTAAGTCTCTCCAATTTAGATATCGATGGTGATGCCTTGCATTCCAGCTTGGCCTTGCCACCTGCGCTTAACGTTTCCACAGCTAAAGTTGCCAAATTGGACATCATGCTTCCTTCCGTGAGTAATGTGCAAGTAGAGCCGATCATTGTGCAAATTGATCGGCTTGATCTAGTTCTGGAGGAGAATTCTGATTTTGATGCATCTGTTAGTAGTACCAACAGTGCCACTTCATCGGCTGCCACCTCGAAGGGTAGTGGTTATGGTTTCGCTGATAAGATTTCTGATGGCATGACTATACAAATTCACACAGTTAATCTATTACTTGAAACTCGTGGTGGTGGGGGCGCGCGTCGAAAAGTGGGAGCAACATGGGCACCACCAATGGCATCTATCACAATACATAACCTTTTGCTGTATACCACAAATGAGAGCTGGCAGGTTGTAAATCTTAAGGAAGCACGGGAATTCTCCAGTAACAAGAAATATATATATGTCTTCAAAGCTTCTCTGAAGAGGGATCAAACCTGA 621 0.4493 MESILARALEYTLKYWLKSFSREQFKLQGRTLSLSNLDIDGDALHSSLALPPALNVSTAKVAKLDIMLPSVSNVQVEPIIVQIDRLDLVLEENSDFDASVSSTNSATSSAATSKGSGYGFADKISDGMTIQIHTVNLLLETRGGGGARRKVGATWAPPMASITIHNLLLYTTNESWQVVNLKEAREFSSNKKYIYVFKASLKRDQT* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1220 206 Pfam N-terminal region of Chorein or VPS13 1 105 IPR026854 -
Amo18g1220 206 PANTHER UNCHARACTERIZED 1 199 IPR026728 -
Amo18g1220 206 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1220 Amo-Chr18 21405322 21407959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1220 - - gmx:100811661 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1220 18 21405322 21407959 Amo18g1220 18 21405322 21407959 ECH