Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1217 ATGGCGGAGCAACACAGCTGCTGCTCATGCTGCTTCAGCTTCATAATAACCATGGGCCTCACCGCCCTCTTCTTCTGGCTCTCCCTCCGTGTTGACCAACCAAAATTCTATCTCGAGTCAATTTACGTTCCTGCCCTCAACAGATCCCTTCCGTCAACAACAAAAAACGACACTGTTTTATTCAAAATGAAGTTCACGAACCCTAACAAAGACAAAGGGATCAAATACGACGCCGTTCGGGTCAACATCTCCGTCTTCCTCTCCCAAAATACCACGCGCCTACTCTCCAACTCCACCGCCGTCGCTCCTTTCTACCAGGGCCGCCAGAAGAAGGCGCATAAGCCTAGCTCTGCCTCCTTCGTCGGAAACCTTACGCCGGCGGCGGGGATGGACGGGAAGGTGTATTTCCGGGTGGATTTTGCGACCGCGGTGAAGTACAAGATCTTGTTTTGGTACACGAAGCGACACGGTATGTGGGGAGGGGCAAATGTGGAAATTAACAATGGGGGTGTGAAGGTGTATCCGAAACCGGTGAGGCTTGGCAACGAGCCACCGAGGATCGTGAACGGCGCACCGGAGTTCCATGGAGGCTATCGTGCGCTTCTTCCGCTATTCCTAGCTGCCCATCTAACCTCCACTACCGGCGCAGGGAGCGAGGCACTACCCTGCCGTCCATCGCGCTGTCGTCGTGCTCCAGGTCTCCAACCCCTCCGCACTTCTGCCGTCGTCAGTCATCGTGTCCGTCGCCTGATCGCCATTGTCCGTCGCACTCAACAGATCTTCCTCACACTCTGCCCAAACTGCTCACTCCTCAACGTCGCGCGCCTCCTCCACGTCACCGGAGCCCTTGGTCCTGAGAGTCTCGTATTCGATTGTCACGGCGGAGGGCCATATACCAACATTGCCAATGGCCGGATTCTAAAGTGGGAAGGAGATAAGTTGGTTGGACTTAGTTTGCTGTCACCTGTTCCAATAGGTACCAAAATGTGA 990 0.5475 MAEQHSCCSCCFSFIITMGLTALFFWLSLRVDQPKFYLESIYVPALNRSLPSTTKNDTVLFKMKFTNPNKDKGIKYDAVRVNISVFLSQNTTRLLSNSTAVAPFYQGRQKKAHKPSSASFVGNLTPAAGMDGKVYFRVDFATAVKYKILFWYTKRHGMWGGANVEINNGGVKVYPKPVRLGNEPPRIVNGAPEFHGGYRALLPLFLAAHLTSTTGAGSEALPCRPSRCRRAPGLQPLRTSAVVSHRVRRLIAIVRRTQQIFLTLCPNCSLLNVARLLHVTGALGPESLVFDCHGGGPYTNIANGRILKWEGDKLVGLSLLSPVPIGTKM* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1217 329 PANTHER OS05G0367900 PROTEIN 5 196 IPR044839 GO:0098542
Amo18g1217 329 PANTHER NDR1-LIKE PROTEIN 5 196 - -
Amo18g1217 329 Gene3D - 268 323 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1217 Amo-Chr18 21209312 21212290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1217 - - vun:114183543 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1217 18 21209312 21212290 Amo18g1217 18 21209312 21212290 ECH
Amo18g1217 18 21209312 21212290 Amo08g1402 08 22869422 22872368 hybridization