Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1197 ATGGAGGAACTCTTCGTAGCTATACTTTCGATGCTTCTGGTTGTAGCACTGATTCCACTGTACTTATGGAAACGCCGCCAGGATTCTCAACCACATCCTCACGCCGATGAACCGGTCCAGGCTCCCCGGGGAGAAGCGGTGGTGCGCCCAGCCGGAAACCGCCGAATGCGTCGGAGACCTGCTGCATCTGGAGCTAGCACTTCGACAGCTCCGCCTGCAACTGCCGAAGAGTCTGGCGATGAAAGTGAGAATGAAGCTGCTGGTGGCGAGAATTACGAGGCTAGAGCAGCAAAGAAAAAGGAGATTAAAAGGCAAGAGAGGGAAGCTCGCCGACAGGCTGAAGATGCTGCACGAGAGTCGAAGCAGGCCAAACAAGATCGTTACTCAGAGATGCGGAGGTTGAAGGATGAAGAACGTGAGGCAAAGGAGCGTCAGTTGGAAGAGGAAGCCAAAGCTCAGAAGGCTAAGGAGGAGGAGGCTGCGGCAATAGAATTTGAGAAGTGGAAAGGTGAATTTTCAGTTGATGATGAAGGTACCCTTGAAGAAGAACAGGATGGTACTGAAGACTTGCTATCCAATTTTGTTGAATATATACAGAAGCAGAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGAACGCAGGAATGTATCAACCGCATCACCAATCTGGAAAGTATGGGCCGTCTTTCGGGTGTGATGGATGATAGAGGGAAATACATATACATCTCGCAGGAAGAAATGAAAGCTGTTGCTGATTATGTTAAGCGGCAGGGAAGAGTTAGCATTTCACACCTAGCTAGTAAATCGAACCAGTTCATTGATTTAGAGCCAAAAACTCAATTCACAGAGGACATTAGTAATTTGGACGAGATAACTGTCAACTGA 897 0.4783 MEELFVAILSMLLVVALIPLYLWKRRQDSQPHPHADEPVQAPRGEAVVRPAGNRRMRRRPAASGASTSTAPPATAEESGDESENEAAGGENYEARAAKKKEIKRQEREARRQAEDAARESKQAKQDRYSEMRRLKDEEREAKERQLEEEAKAQKAKEEEAAAIEFEKWKGEFSVDDEGTLEEEQDGTEDLLSNFVEYIQKQKCVPLEDLAAEFKLRTQECINRITNLESMGRLSGVMDDRGKYIYISQEEMKAVADYVKRQGRVSISHLASKSNQFIDLEPKTQFTEDISNLDEITVN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1197 298 Coils Coil 95 163 - -
Amo18g1197 298 SUPERFAMILY "Winged helix" DNA-binding domain 184 254 IPR036390 -
Amo18g1197 298 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 89 294 - -
Amo18g1197 298 MobiDBLite consensus disorder prediction 92 154 - -
Amo18g1197 298 MobiDBLite consensus disorder prediction 28 154 - -
Amo18g1197 298 Pfam DDRGK domain 94 277 IPR019153 -
Amo18g1197 298 SMART DDRGK_2 93 278 IPR019153 -
Amo18g1197 298 Gene3D - 189 246 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1197 Amo-Chr18 20718633 20722115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1197 K23344 - gmx:100810584 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1197 18 20718633 20722115 Amo18g1197 18 20718633 20722115 ECH
Amo18g1197 18 20718633 20722115 Amo08g1390 08 22670196 22673700 hybridization