Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3157 ATGAAAGGAGAGACGGTGACTCTGCTGCTTGTGAACCTGGCGGGGATCATGGAGAGGGCCGACGAGTCCCTCCTCCCCGGCGTCTACAAGGAAGTCGGTGAGGCCCTCCACACAGACCCCACCGGCCTCGGATCCCTCACTCTCTTCCGATCCATCGTCCAGTCCTCCTGCTACCCCCTCGCCGCCTACCTCTCCCTCCGCCACAACCGCGCCCACGTCATCGCCATCGGCGCTTTCCTCTGGGCCGCCGCCACCTTCCTCGTGGGCTTCTCCTCCACCTTCTTCCAGGTGGCTGTGTCACGAGGGCTTAATGGGATTGGCCTTGCACTCGTTACCCCTGCAATTCAGTCTCTTGTTGCTGACTCAACTCATGACAACAATCGCGGCATGGCTTTTGGATGGCTTCAACTCACCGGCAACATTGGTGCCATTCTTGGTGGCTTCTTCTCCATGTTGATTGCTCCCTTAACCATCATGGGCATCCCTGGTTGGAGAATTTCCTTCCATCTAGTTGGATTCATTAGTGTTCTAGTTGGTGTGCTAGTTTTCCTTTTCGCCAAGGATCCACACTTCTCGGATAATGGTAGCCGTGAACTTGAACTTGAACTTGAAGTTTCTGCGAAAATGCGCCGGAAAGACGCTGCCGGTAGAACATTCTGGTCGGAAGTGAAAAATTTATTTCAGGAAGCCAAGTCGGTTTCCAAGATTTTGTCTTTTCAGATCATTGTTGCGCAGGGTGTCACCGGTTCATTTCCCTGGTCAGCTTTGTCATTTTCACCAATGTGGCTTGAGCTTAGTGGATTTTCCCACCAGAAAACTGCATTTCTCATAGGTTTGTTTGTGGTTTCTTCATCCATTGGGGGTTTGTTTGGAGGCAAGATGGGGGACATACTTTCGAAACGGCTTCCAAACTCTGGAAGGATAATTCTGGCACAAATAAGCTCTGCATCCGCAATCCCCCTTGCAGCAATACTTTTACTGGGGTTGCCACAAAATCCATCTACTATTATACCTCATGGTTTGGTTCTGATCATTGTGGGGTTCTGCATATCTTGGAATGCTCCAGCTGCAAACAATCCAATTTTTGCAGAGATAGTTCCAGAGAGATCTCGAACTAGTGTATATGCGATGGATCGATCTTTTGAGTCTATACTATCATCCTTTGCTCCTCCTGCGGTGGGGATTTTGGCTCAACATGTTTATGGGTATAAGCCTATTCCTAAAGGTGCTACGGTATCTCAAGAAATTTTAACAGATAGAGAGAATGCTGCATCACTGGCAAAGGCTTTATATACAGCAATTGGAATTCCAATGGCGCTATGCTGTTTCATATACTCGTTTCTCTATCATGCTTACCCAAGAGACAGGGAACGTGCTAGGATGGAGGCTCTAATAGAATCGGAGTTGCAGGAAATTGAATCACCTAGTTTGCCCTTGGATAGAGAGTTTGAGAAAGAAGGGTTGACTGGTGATTTTGATCATGATGGTGAAGGTAACACATTGCTCCAACGGAGGTTGACATTTGCCGATTGGACAAATAGTTTTCGCAACTCTGCAGCCGGCTGA 1566 0.4847 MKGETVTLLLVNLAGIMERADESLLPGVYKEVGEALHTDPTGLGSLTLFRSIVQSSCYPLAAYLSLRHNRAHVIAIGAFLWAAATFLVGFSSTFFQVAVSRGLNGIGLALVTPAIQSLVADSTHDNNRGMAFGWLQLTGNIGAILGGFFSMLIAPLTIMGIPGWRISFHLVGFISVLVGVLVFLFAKDPHFSDNGSRELELELEVSAKMRRKDAAGRTFWSEVKNLFQEAKSVSKILSFQIIVAQGVTGSFPWSALSFSPMWLELSGFSHQKTAFLIGLFVVSSSIGGLFGGKMGDILSKRLPNSGRIILAQISSASAIPLAAILLLGLPQNPSTIIPHGLVLIIVGFCISWNAPAANNPIFAEIVPERSRTSVYAMDRSFESILSSFAPPAVGILAQHVYGYKPIPKGATVSQEILTDRENAASLAKALYTAIGIPMALCCFIYSFLYHAYPRDRERARMEALIESELQEIESPSLPLDREFEKEGLTGDFDHDGEGNTLLQRRLTFADWTNSFRNSAAG* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3157 521 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 456 IPR020846 GO:0022857
Amo17g3157 521 PANTHER SPINSTER 1 473 IPR044770 -
Amo17g3157 521 Gene3D MFS general substrate transporter like domains 4 412 IPR036259 -
Amo17g3157 521 SUPERFAMILY MFS general substrate transporter 6 458 IPR036259 -
Amo17g3157 521 PANTHER - 1 473 - -
Amo17g3157 521 CDD MFS_spinster_like 8 445 IPR044770 -
Amo17g3157 521 Pfam Major Facilitator Superfamily 13 358 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3157 Amo-Chr17 136017379 136019155 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3157 - - gmx:100783378 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3157 17 136017379 136019155 Amo17g3157 17 136017379 136019155 ECH
Amo17g3157 17 136017379 136019155 Amo07g1691 07 48222120 48227117 hybridization