Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3149 ATGCCACTACCACAGGACCTCACTCCCCACCAACAATCCCACTGTTTCCTCAATTTCCCTTCCGATTTCTCTTCCCTCACCGCGCCACCGCCCGGGGGATTGTTCCTCGAACCCGCAACTCCAGATTCCTTCCTCCGCCTGCTTCCCGCCGCCTCGATTCGTGCCGAATTGAATCCCTCGCCGCCACGCCGGAGGCTTAAGGCGGCAGTAGCTGCTAGCTGCTTCTTGTCGGTGAGCTTGCCGAGTGCTAAACTCGTGGTGCCGAATGGGGACAACGGCTCCGACAAGGAGACAAGTTCGGAGGAGGGTGTTGTTGAGGTACAACACAAGGTTAGGACGGTACGAGGAGGCAATGCCGTCAACAACACCACTAAGCATCTATGGGCTGGTGCCGTAGCTGCCATGGTTTCTAGAACTTGTGTTGCTCCACTTGAAAGACTTAAGCTGGAGTATATAGTTCGCGGGGAGAAGAAGAATATCGTTGAGCTTGTGAGAAAGATAGCCACTTCTCAGGGTCTGAGGGGCTTTTGGAAGGGGAACCTTGTAAATATTCTGCGGACGGCTCCATTCAAGGCAGTGAATTTTTGTGCTTATGATACATATAGGAAGCAGCTCCTTAGATTCTCCGGAAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGAATTACTGCTACCATTATTTGCCTTCCACTTGACACAATCCGGACCAAGTTGGTGGCACCTGGTGGGGAAGCTTTGGGTGGTGTTATTGGTGCTTTCCAATACATGATTCGGACTGAAGGCTTCTTTTCTCTCTACAAGGGTTTGGTACCGTCAATTATAAGTATGGCTCCTTCTGGTGCAGTTTTTTATGGTGTATATGATATACTCAAATCAGCTTATTTGCATTCACCCAAAGGAAGGAAGCGAATCCAGAATTTGCACAAACAGGGTAAGGAATTGAGTGCATTGGATCAGCTTGAGTTAGGACCAGTAAGGACGCTGTTGTATGGTGCTATTGCCGGTGCTTGTGCAGAAGCTGCTACATATCCATTCGAAGTTGTAAGGAGGCAGCTTCAATTGCAAGTCCAGTCTACCCGTTTAAGTTCTTTTGCAACTTGTGCCAAAATAGTGGAACATGGAGGCATTCAAGCTCTGTATGCAGGACTTATTCCCAGCTTACTCCAGGCATGTCAATTTACTTCCTTGCATGCCCAATTTACTTATATTTTACTTTATGCACTATATTTATCCATTTAG 1257 0.4789 MPLPQDLTPHQQSHCFLNFPSDFSSLTAPPPGGLFLEPATPDSFLRLLPAASIRAELNPSPPRRRLKAAVAASCFLSVSLPSAKLVVPNGDNGSDKETSSEEGVVEVQHKVRTVRGGNAVNNTTKHLWAGAVAAMVSRTCVAPLERLKLEYIVRGEKKNIVELVRKIATSQGLRGFWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITATIICLPLDTIRTKLVAPGGEALGGVIGAFQYMIRTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPKGRKRIQNLHKQGKELSALDQLELGPVRTLLYGAIAGACAEAATYPFEVVRRQLQLQVQSTRLSSFATCAKIVEHGGIQALYAGLIPSLLQACQFTSLHAQFTYILLYALYLSI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3149 418 Pfam Mitochondrial carrier protein 214 301 IPR018108 -
Amo17g3149 418 Pfam Mitochondrial carrier protein 328 403 IPR018108 -
Amo17g3149 418 Pfam Mitochondrial carrier protein 123 206 IPR018108 -
Amo17g3149 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 299 IPR018108 -
Amo17g3149 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 204 IPR018108 -
Amo17g3149 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 328 413 IPR018108 -
Amo17g3149 418 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 26 402 - -
Amo17g3149 418 SUPERFAMILY Mitochondrial carrier 120 397 IPR023395 -
Amo17g3149 418 Gene3D Mitochondrial carrier domain 118 414 IPR023395 -
Amo17g3149 418 PRINTS Mitochondrial carrier protein signature 126 139 IPR002067 GO:0055085
Amo17g3149 418 PRINTS Mitochondrial carrier protein signature 139 153 IPR002067 GO:0055085
Amo17g3149 418 PRINTS Mitochondrial carrier protein signature 179 199 IPR002067 GO:0055085
Amo17g3149 418 PRINTS Mitochondrial carrier protein signature 229 247 IPR002067 GO:0055085
Amo17g3149 418 PRINTS Mitochondrial carrier protein signature 272 290 IPR002067 GO:0055085
Amo17g3149 418 PRINTS Mitochondrial carrier protein signature 337 359 IPR002067 GO:0055085
Amo17g3149 418 PANTHER SOLUTE CARRIER FAMILY 25 26 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3149 Amo-Chr17 135926835 135930138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3149 32 395 Organic Solute Cotransporters AT5G64970 64.286 1.68e-160 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3149 - - gmx:100816623 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3149 17 135926835 135930138 Amo17g3149 17 135926835 135930138 ECH