Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3137 ATGGCTTCGCGCTTTTTCTTCCTCCTCCGTACCAACGCCATCAATAAATCCTCCAAAGCCCTAATCCCAACCCTTCCAAACCCTATTTTCTCCATTTTCAGTTCGCAATTGTCCACCTCCTTCCTCGTCACCAAAACCCCAAAGAAGCTCCGAAAGAAGCGCAAGAAAAAGGACAGTCCAAGAACCAAGCTCGTTCAGACCCAACCCAACCTCATTCCTCACCTTGAGCGCATTGTCGAACGCGACGCGCTCTTCAGATTCATCAACAAAACCAAGCAATTCCTCTCCGCCCAACCGGAGCACGTGCTACGCCTCGACGACGCCGGGAAACTCCATCGCGAGCTAGGGTTCCCTCGCGGCCGCAATGTTACGCGCTTCATACTCCGCCACCCGCTTCTCCTCCAGACCTACCGCCACACCGACGGCAAGATGTGGTTAGGGTTCACTGATCTCATGGAAGACCTTCTCTTGGAGGAGCAAGCAATCATGGATTCCATGGAGCAAGACCGCGTTGCAAAGGTACGAAAATTGCTCATGATGACGTCACAAAAGCGTGTTCCTTTAAGCAAAATTCACCACTGTAGAACCTTGTTCGGCATACCTGACGATTTCAGGGACCGGGTGAAGAAATACCCGAATTACTTTCGGGTTGTGGATGGTGGTGGCGGGAAGAGGGTCCTTGAGTTGGTTAATTGGGATCCTCTGTTAGCGGTGACCGCAATTGAGAGGGGATTCGTGGTTAATGAGGATGGTGCTAAGAGGAAGTTTAGGTTTCCTGTGAAGTATGGTAGGGATTTGGGTTTGGAATTGGAGGATACTAGGAAGCTGAACTTGTTGAACACTTTGCCTTTGGTTTCGCCTTATTCGGATGGGTCGAAGTTGGATGTGTGGACCATTGAAGCGGAGAAGTTTAGGGTTGGTGTGGTTCATGAATTTTTGAGCTTGACATTGGAGAAGAAGGCATCAATTCACCACCTTGTGGAGTTCAAGGAAGAGTTTTGTTTGACAAAGCATACTTACCATATGCTGTTGAAGCAGCCAAGGGCATTTTATTTGGCGGGGACTGAGATGAACTGGGTTGTGTTCCTGAAGGATGCTTATGATGAGAGTGGTAATTTGGTTGATAAGGATCCACAGGTGGTGTTCAATGAGAAGTTGTTTAAGTACGCTCAGATGCAAGAAATGGGAACTGGTTCTGAGGCTATGGAAATGGAATGA 1218 0.486 MASRFFFLLRTNAINKSSKALIPTLPNPIFSIFSSQLSTSFLVTKTPKKLRKKRKKKDSPRTKLVQTQPNLIPHLERIVERDALFRFINKTKQFLSAQPEHVLRLDDAGKLHRELGFPRGRNVTRFILRHPLLLQTYRHTDGKMWLGFTDLMEDLLLEEQAIMDSMEQDRVAKVRKLLMMTSQKRVPLSKIHHCRTLFGIPDDFRDRVKKYPNYFRVVDGGGGKRVLELVNWDPLLAVTAIERGFVVNEDGAKRKFRFPVKYGRDLGLELEDTRKLNLLNTLPLVSPYSDGSKLDVWTIEAEKFRVGVVHEFLSLTLEKKASIHHLVEFKEEFCLTKHTYHMLLKQPRAFYLAGTEMNWVVFLKDAYDESGNLVDKDPQVVFNEKLFKYAQMQEMGTGSEAMEME* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3137 405 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 1 399 IPR045040 GO:0003723
Amo17g3137 405 Pfam Plant organelle RNA recognition domain 73 394 IPR021099 GO:0003723
Amo17g3137 405 PANTHER OS09G0473400 PROTEIN 1 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3137 Amo-Chr17 135703093 135704310 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3137 - - adu:107460874 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3137 17 135703093 135704310 Amo17g3137 17 135703093 135704310 ECH