Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3133 ATGGCCACTTTATTTTCTTCTCAATGCTTTATCAAAATCTTTCTTCTCATTTCACTCTTCCAACTTTCTTTAGCTGCTAGAAACATGAAGGAGCTGGTTCAAGACCAATCCCAGCTACTCCGCTACCATAACGGTCCGTTACTGTACGGGAAAATCTCCGTTAACCTCATATGGTACGGTCAGTTCAAACCCTCCCAAAAGGCCATAGTCTCCGACTTCATAACCTCCCTCACATCACCGCCTCAAACCAACCAACCATCCGTTGCCACGTGGTGGAAAACCACCGAGAAATACTACCACCTCACCTCCAAGAAGAAGGGAACTTCCTCTCTTTCACTTTCACTGGGAAAACAGATTCTCGATGAGAGTTACTCTCTGGGGAAATCCTTAACGAGCAAGAATCTCGTTGAGTTGGCATCAAAGGGGGACCAGAAAGACGCCATCAACGTCGTTCTAACCTCCGCTGACGTGGCAGTGGAAGGCTTCTGTATGTCCCGCTGCGGGACCCACGGTTCTTCTTCTTCTCCTTCTCCTTTGAAGGGAAAGAATAACAAGTTCGCTTACATCTGGGTTGGTAACTCCGAGACACAATGCCCGGGCCAGTGCGCGTGGCCCTTCCATCAGCCCATCTACGGGCCTCAAAGCCCGCCACTTGTTGCTCCAAACAACGACGTGGGCCTAGACGGTATGGTCATCAACCTTGCTAGCCTTTTGGCAGGAACCGCCACTAACCCCTTCGGGAACGGTTACTACCAGGGCCCAGCTGAGGCGCCTCTAGAAGCTTCTTCAGCTTGCCCTGGGGTTTATGGAAAAGGTGCATACCCTGGCTATGCTGGGAACTTGTTGGTGGATTCCGCAACCGGTGCTAGCTACAATGCAAATGGTGGTAATGGAAGGAAGTACTTGCTTCCTGCTCTCTATGATCCTTCTACGTCTTCTTGCTCAACGCTCGTATTAGAACTTTCTATTTTATCGATAGAGGCATCTGTTCAATTTAGGTATGTCGATTTTGGCATTTTTTTTATTTCATTGTGGGATAAGGATAACCAACCCATCCGAGTTCACCTTGATCCTGACTTCTATGTTCCTGAGCTAATGGACCCAGAGACACTTGATAATGTATCAAGAGTGTTCCACATAAAGTACACCAAGATGGATGAGGACTCATCAGTTGATGTGATTGTTCTCTTCGGGTCTGGACCATCGGATGATCAGTTTTCATCAGATGCTGATGAAGACAATGATCAAGGTGGGGCACTGGTAGGGGATAATCTCAATGATCCAATAGATTTGTCTAGTGGAAGTAGTTTATCATTGGAGGTTAATGAACAAAGTCATGCGGCAAACGAGTTGGTTGATCCTAGATACTCTCCAGAGGTTTCTTATGAAAAGAAAATCACAGCTTCGGATGTTGCACAACCTAGATTGTATTTGGCTTCAAAATTCGCTGCGTATCTTAAACTGTGTGAAGATGGCTCAATTTGGACAATCACTGGTCCAGATTCCAATGTAGAGAATAATGTCTTCTTCTTCCAGTTACTGAAAAGTGGAGAAAGAGGTGGAGAATGA 1569 0.4627 MATLFSSQCFIKIFLLISLFQLSLAARNMKELVQDQSQLLRYHNGPLLYGKISVNLIWYGQFKPSQKAIVSDFITSLTSPPQTNQPSVATWWKTTEKYYHLTSKKKGTSSLSLSLGKQILDESYSLGKSLTSKNLVELASKGDQKDAINVVLTSADVAVEGFCMSRCGTHGSSSSPSPLKGKNNKFAYIWVGNSETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQGPAEAPLEASSACPGVYGKGAYPGYAGNLLVDSATGASYNANGGNGRKYLLPALYDPSTSSCSTLVLELSILSIEASVQFRYVDFGIFFISLWDKDNQPIRVHLDPDFYVPELMDPETLDNVSRVFHIKYTKMDEDSSVDVIVLFGSGPSDDQFSSDADEDNDQGGALVGDNLNDPIDLSSGSSLSLEVNEQSHAANELVDPRYSPEVSYEKKITASDVAQPRLYLASKFAAYLKLCEDGSIWTITGPDSNVENNVFFFQLLKSGERGGE* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3133 522 PANTHER PROTEIN EXORDIUM-LIKE 5 7 318 IPR006766 -
Amo17g3133 522 PANTHER PROTEIN EXORDIUM-RELATED 7 318 - -
Amo17g3133 522 MobiDBLite consensus disorder prediction 402 422 - -
Amo17g3133 522 Pfam Phosphate-induced protein 1 conserved region 40 317 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3133 Amo-Chr17 135573844 135577216 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3133 - - gmx:100794117 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3133 17 135573844 135577216 Amo17g3133 17 135573844 135577216 ECH
Amo17g3133 17 135573844 135577216 Amo07g1742 07 49852204 49853373 hybridization
Amo17g3133 17 135573844 135577216 Amo17g3133 17 135573844 135577216 PCT
Amo07g1742 07 49852204 49853373 Amo17g3133 17 135573844 135577216 PCT
Amo17g3133 17 135573844 135577216 Amo07g1742 07 49852204 49853373 PCT