Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3087 ATGGCCCAACAGAAAAATAAGCTAAGGAATTTGGCTTACAATATCAAAGACAAAGCCTCCGTTATAGTCGCCACCCTCTCCATCAAGCGCCACGTGTCCTCCGTCCGAGTCCGCGTCCTCCGCGCCACTACCCACGCTCTCAGCGGCCCTCCCTCCGAGGATCGAATCGCCGCCGTTCTTGCCGTCGCATCATCCAACAACACCTCCCACCTCCTCCCCCGTGTCTGCATCGACGCCCTGATGGACCGCCTCCACCGCACCGGCAGTGCCACCGTGGCACTCAAGTGTCTCTTCACCCTCCACAACGTCGTCGTCAAGGGACCGTTCACCCTCAAAGATCAGCTCGCCTATTACCCTTCCTACGGCGGCCACAACTTCCTTAACCTCTCAACCTTCCGCGATGACTCGGACTTGGAATCGCTCCAACTCAGTGACTGGGTTCGTTGGTACGCCGGAGTCATAGAACAAAGCCTAACCGTTTCAAGAATCCTAGGCTATTATCTCCGATACTCATCATCTTCTTCTTCTAACACCATCCAAGAAACAAACTCTTTGACTCTTGGAACTTCAAACGCGGATTTACTGTACAAGATAGAAGCTCTGGTTGCGTTCTTGGAACAGCTAGGTAAGGTTCCAGAGTCATTGCAGCTTCAGAAGAAGGAGCTGGTTTACGAAGTGGTGAAGCTTGTAGGGGAAGATTACAGAAGCGTTCAGAGAGAGATAGTGATGAGGTTGGAGGAGATGGAGGGTAGAATGGAGAATTTGGATGTTGGTGAAGTGAGTGAGTTGGTTGGGTATGTGAAGAGGATGGAGGAGTGTAAGGAGAAGCTTGTGATGCTGTTCGTTAATAAAGGGAGGAACGGTGGCTTCTGGGATTTGGTTAGAGAAACGAAGGAGAAAGGGTTGAAGATCAAAGGGGAAATTGAAGGCAAGTGGCTCACGGTGGTGGTGGCTTCCAACACCGCCGCCGATTCCATCCGGTTTAACACTAACCCGTTTCTTGAACCCGGTCAAACCAGTCCGGTCCCACTCACCAGTTTTGCTTTAGCAACGGTAAGATGA 1062 0.516 MAQQKNKLRNLAYNIKDKASVIVATLSIKRHVSSVRVRVLRATTHALSGPPSEDRIAAVLAVASSNNTSHLLPRVCIDALMDRLHRTGSATVALKCLFTLHNVVVKGPFTLKDQLAYYPSYGGHNFLNLSTFRDDSDLESLQLSDWVRWYAGVIEQSLTVSRILGYYLRYSSSSSSNTIQETNSLTLGTSNADLLYKIEALVAFLEQLGKVPESLQLQKKELVYEVVKLVGEDYRSVQREIVMRLEEMEGRMENLDVGEVSELVGYVKRMEECKEKLVMLFVNKGRNGGFWDLVRETKEKGLKIKGEIEGKWLTVVVASNTAADSIRFNTNPFLEPGQTSPVPLTSFALATVR* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3087 353 Gene3D - 7 167 IPR008942 -
Amo17g3087 353 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 342 IPR045192 GO:0048268|GO:0072583
Amo17g3087 353 SUPERFAMILY ENTH/VHS domain 35 165 IPR008942 -
Amo17g3087 353 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 342 - -
Amo17g3087 353 CDD ANTH_N_AP180_plant 36 161 - -
Amo17g3087 353 ProSiteProfiles ENTH domain profile. 27 168 IPR013809 -
Amo17g3087 353 Pfam ANTH domain 36 281 IPR011417 GO:0005543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3087 - - gmx:100804881 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3087 17 134863458 134865197 Amo17g3087 17 134863458 134865197 ECH
Amo17g3087 17 134863458 134865197 Amo17g3087 17 134863458 134865197 PCT