Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3081 ATGGCGAGCGCGCTTGAAACCCTCTGCGGCCAAGCTTACGCGGTTGCGGAACGCACCGGTTTGGTTGCCATATGGCTGATCCCTCTTCACCTCAGCTTTCCCTTCCAATTCTCGCTGCAAAGATTCTTGCAGTGTCAGCTCAAGACACGTGTCGCGGCGTGGATGGCAGGTGTTTCGCTTGCCATCCACGTGGCAGTGAGTTTGGTTTTTGTGTCCAAGATGAAGGTTGGGATTGTTGGCGCTGCGCTTTCTATTGGGTTCTCGTGGTGGGTTTCGGTTGTGGGAATGCTTTCGTACACTCTCTTTGGTGGGTGTAAAGATACATGGACTGGTTTCTCTTCTGAAGCTTTTCTTGGACTCTGGGAATTCTTCAAGTTATCTTTTGCTTCTGGCATCATGCTTCTGTTAGAGAATTTCTATTACAGGTTGTTGCTTATAATGTCGGGTTATATGGACAACTCTGAGGTTGCTATCGATGCTCTTTCGGTTTGTAATACTATTTATGCTTGGGAATCCATGATACCTCTTGGATTTTTGGCTGCATCCGGGGTGCGTGTAGCAAATGAGCTTGGCGCAGGCAACGCAAAAGGGGCAAAATTTGCAACAGCTATTTCATTGCTAAACACTGTGGTGGTGGGATTTATATTTTGGTTGATAATTATGATCTTCAATGAGAATCTTGCTTTGATCTTTACATCAAGCTCCGCTATTGTCCAAATGGTCAATGAGCTGTCAATCATGTTGGCTTTTACAATTCTGATTAATTGCCTCCAACCTGTTCTTTCAGGGGTAGCAGTGGGATGTGGAAATCAAGCAATAGTGGCATACGTTAACATTGCAAGTTACTATTTGATGGGAATGCCTCTTGGGATCCTCCTAGGCTGGTTGCTGCCTTCGGGTATTATTGGTATGTGGACGGGAATGTTGAGTGGAACGGTCGGTCAAACGTTGATTTTGATCGTTATTACGATGAGATGTGATTGGGATAAAAAGGTACTGAAAGCTCAAATTCTTGTCAAGGAGAAAGCACTAGTCTCCAACCATCAAATTGATAAGGTATTGCCATCGATGAAGAAACACGGCGAACACGAAGAACATGGCAACCTTACCGAAACCCTCCTCCTTCAACATAACGACCAAAAGATACAACATCAGCTCTGGATCGAGACCAAGAAGCTATGGCACATCGTGGGCCCCTCCATCTTCAGCCGCGTTGCCACCTTCACCATGAACGTCGTCACCCAAGCCTTCGCTGGACACCTCGGCGAACTCGAACTCGCCTCCATCTCCATCGCCAACACCGTCATTGTTGGCTTCAATTTTGGCCTCCTCTTGGGAATGGCGAGCGCGTTGGAGACACTGTGCGGGCAAGCGTTTGGGGCAAAAAAGTACGGCATGCTGGGGATATACATGCAGAGGTCATGGGTGGTTTTGTTTCTGTGCTGCTTCTTGCTCTTGCCATTTTACGTATTTGCCACTCCCATCTTGAAGCTTCTAGGGCAGCCTGATGACGTGGCGGAATGGAGTGGTATGGTGGCTGTGTGGCTCATCCCTCTTCACTTCAGCTTTGTATTCCAGTTCCCGCTGCAGAGGTTTCTTCAGTGCCAGCTCAAGACGGCGGTGATTGCGTGGGTTTCGTTGCTGGGCCTCGTGGTCAACGTGGTCACCAGCTGGCTGTTCATCTATGTGTGGGACTTTGGAGTTGTTGGTGCCGCCATTGCTCTCAATTTGTCCTGGTGGGTTCTTGTGATTGGGATGTTTGCTTATACTGCTTGCGGCGGTTGCCCATTGACTTGGACCGGTTTTTCCATGGAAGCGTTTTCTGGTCTATGGGACTTTCTCAAACTCTCTGCTGCTTCTGGTGTCATGTTATGCTTAGAAAACTGGTATTACAGAATATTGGTGCTAATGACTGGGCAGTTAGAGAATGTGACGGTTGCTGTTGATGCCTTGTCGGTATGTATGACTATCAATGGTTGGGAAATGATGATTCCCCTGGCCTTCTTCGCTGGTGTTGGAGTAAGGGTAGCAAATGAGCTAGGCGCAGGAAATGGGAAAGGAGCAAAATTTGCAACACAAGTGGCAGTGGCACAATCAATTGTGATTGGGGTTGTGTTCTGCGTGATAATAATGATTTTTCACGACCAATTGGCTTACTTATTCACCTCCAGTCCCCAAGTCCTTGATGCCGTTGACCACATGGCTTTCCTCTTAGCCATCACCATCCTCCTCAACAGTGTTCAACCCATTTTGTCAGGAGTGGCTGTTGGTTCGGGATGGCAAGCATATGTAGCATATATAAATATAGGGTGCTATTATGTTATTGGACTCCCTCTTGGAATAATCATGGGATGGATCTTCAAAACTGGCGTCGGAGGTATATGGGGAGGGATGATATTTGGAGGCACTGGAATCCAGACGCTCATACTCATCGTTGTAACGTCACGATGTGATTGGGAAAAGGAGGCTGAAGAAGCTAGTTCCCGGGTAAAGAAGTGGTCAAATTCTAAATCGAACGACCAACTAGAGGGCACCTCTGATCCCCATTAA 2550 0.4745 MASALETLCGQAYAVAERTGLVAIWLIPLHLSFPFQFSLQRFLQCQLKTRVAAWMAGVSLAIHVAVSLVFVSKMKVGIVGAALSIGFSWWVSVVGMLSYTLFGGCKDTWTGFSSEAFLGLWEFFKLSFASGIMLLLENFYYRLLLIMSGYMDNSEVAIDALSVCNTIYAWESMIPLGFLAASGVRVANELGAGNAKGAKFATAISLLNTVVVGFIFWLIIMIFNENLALIFTSSSAIVQMVNELSIMLAFTILINCLQPVLSGVAVGCGNQAIVAYVNIASYYLMGMPLGILLGWLLPSGIIGMWTGMLSGTVGQTLILIVITMRCDWDKKVLKAQILVKEKALVSNHQIDKVLPSMKKHGEHEEHGNLTETLLLQHNDQKIQHQLWIETKKLWHIVGPSIFSRVATFTMNVVTQAFAGHLGELELASISIANTVIVGFNFGLLLGMASALETLCGQAFGAKKYGMLGIYMQRSWVVLFLCCFLLLPFYVFATPILKLLGQPDDVAEWSGMVAVWLIPLHFSFVFQFPLQRFLQCQLKTAVIAWVSLLGLVVNVVTSWLFIYVWDFGVVGAAIALNLSWWVLVIGMFAYTACGGCPLTWTGFSMEAFSGLWDFLKLSAASGVMLCLENWYYRILVLMTGQLENVTVAVDALSVCMTINGWEMMIPLAFFAGVGVRVANELGAGNGKGAKFATQVAVAQSIVIGVVFCVIIMIFHDQLAYLFTSSPQVLDAVDHMAFLLAITILLNSVQPILSGVAVGSGWQAYVAYINIGCYYVIGLPLGIIMGWIFKTGVGGIWGGMIFGGTGIQTLILIVVTSRCDWEKEAEEASSRVKKWSNSKSNDQLEGTSDPH* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3081 849 PANTHER PROTEIN DETOXIFICATION 371 830 - -
Amo17g3081 849 MobiDBLite consensus disorder prediction 832 849 - -
Amo17g3081 849 CDD MATE_eukaryotic 389 825 IPR045069 GO:0042910|GO:1990961
Amo17g3081 849 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 337 - -
Amo17g3081 849 PANTHER MULTIDRUG RESISTANCE PROTEIN 371 830 - -
Amo17g3081 849 Pfam MatE 621 781 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo17g3081 849 Pfam MatE 131 291 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo17g3081 849 Pfam MatE 399 559 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo17g3081 849 MobiDBLite consensus disorder prediction 827 849 - -
Amo17g3081 849 CDD MATE_eukaryotic 1 334 IPR045069 GO:0042910|GO:1990961
Amo17g3081 849 PANTHER PROTEIN DETOXIFICATION 2 337 - -
Amo17g3081 849 TIGRFAM matE: MATE efflux family protein 33 305 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo17g3081 849 TIGRFAM matE: MATE efflux family protein 399 795 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3081 Amo-Chr17 134796317 134813455 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3081 K03327 - gmx:100500204 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3081 17 134796317 134813455 Amo17g3081 17 134796317 134813455 ECH