Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3065 ATGACTCATTCTGGATCTTCTCTCCCCGATCTCCCCAACTGCACTTCCACCGCCGCCCCCATGTCGGAGATCCGTTCTCCGCCGCCGGATCGGGTGCTGGAGATTGTCCTCGAGAACGTGCTCCACTTCCTCACCTGCCGCCGGGACCGGAACGCCGCCTCACTCGTCTGCCGCTCATGGTGTCGGGCGGAGGCGCTCACCCGATCTGATCTCTTCATCGGAAACTGCTACGCCGTTTCTCCACACCGCGCCACCTCCCGCTTCCGCCGTGTCCGGTCCCTCACCGTGAAGGGCAAGCCTCGCTTCGCGGACTTCGATCTGTTGCCGCTTAACTGGGGTGCCCACTTCTCTCCCTGGGGCTCTGCACTCGCCGATGCCTACCCTTGGCTCGAGAAGCTTCACCTGAAGCGTATGTCTCTCACTGATGATGACCTCAACCTTATCGCTCGCTCCTTCCCCTCCTTCAAGGAACTCGTTCTCGTGTGCTGTGAAGGTTTTGGGATCGCTGGAATTGCCGCTGTTGCTGCCAACTGCAGGTTGCTGAGAGTGCTTGACCTTGTGGAGTCTGTGGTTGAGGATGCTGATGAAGACGAGGAGGTGATGGATTGGATATCATGTTTTCCGGATGGTGAGACTCATCTGGAGTCTCTTGTGTTTGAGTGCGTTGAGTGCCCTGTAAATTTTGAGGCCTTGGAGAGGCTAGTGGCTAGATCACCTTACCTGAAGAAGCTTAGGCTGAATCATTATGTTTCCATTCCTCAATTGTACCGCCTGATGCATCGAGCTCCACAGCTCACCCATCTTGGGACAGGTTCATTCTGTGCATCAGATGATGTGGCTGTTGGTGATCAGGAATTGGATTACTCATCTGCCTTTGCAGCTTGCAAATCCCTAGTTTGTTTGTCTGGGTTCCGGGATATTTTGCCGGATTACTTACCGGCCATCTATCCGGCCTGTGCTAATCTCACATCTTTGAATCTTAGCTATGCTGATGTTAACGCTGACCAACTCAAACCGGTCATATTGCAATGTCATAAACTCCAAACATTATGGGTACTTGATTCAATTTGTGATGAAGGTCTTCAAGCTGTGGCTGCAACTTGCAAAGATTTGCGGGAGCTTCGAGTTTTCCCTGGTAACACGAGGGAAGAGGCCGAAGGTCCAGTTTCTGAAGTAGGCTTAGAAGTAATTTCTCAGGGTTGTAGGAAATTGCAATCGATCCTCTTCTTTTGCCAAAGAATGACGAATGCAGCTGTGATAGCTATGTCAAAGAATTGCCCGGATCTTGTTGTATTTCGTCTTTGTATAATTGGGCGATACCGGCCAGACCCTGAGACCCATGAACCCATGGATGACGGTTTTGGTGCTATTGTTATGAATTGTAAGAAACTTACTCGACTTGCTGTATCTGGGTTATTGACTGATCAAGCTTTTCGTTACATTGGGATGTATGGGAAATTACTTCGAACACTGTCAGTTGCCTTTGCTGGAGACTCAGATCAGGGCCTTAAATATGTGCTAGAAGGATGCCCTAATTTACAAAAGCTTGAAATCAGGGACAGCCCATTTGGGGATGCAGCATTGCATTCCGGGTTGCATCATTTTTACAACATGAGATTTCTCTGGATGTCAACGTGTAAATTGACACGCCAAGGTTGCCAAGAAATTGCAAGAGCATTGCCCCATCTAGCATTGGAAGTCATTGATAGTCAAGAAGACAAAGCTGATGATCATATCGAGATATTATACATGTATCGGTCTCTCGATCGGCCCCGGAATGATGCTCCTAAATGTGTTACTATTCTTCAATAG 1812 0.4934 MTHSGSSLPDLPNCTSTAAPMSEIRSPPPDRVLEIVLENVLHFLTCRRDRNAASLVCRSWCRAEALTRSDLFIGNCYAVSPHRATSRFRRVRSLTVKGKPRFADFDLLPLNWGAHFSPWGSALADAYPWLEKLHLKRMSLTDDDLNLIARSFPSFKELVLVCCEGFGIAGIAAVAANCRLLRVLDLVESVVEDADEDEEVMDWISCFPDGETHLESLVFECVECPVNFEALERLVARSPYLKKLRLNHYVSIPQLYRLMHRAPQLTHLGTGSFCASDDVAVGDQELDYSSAFAACKSLVCLSGFRDILPDYLPAIYPACANLTSLNLSYADVNADQLKPVILQCHKLQTLWVLDSICDEGLQAVAATCKDLRELRVFPGNTREEAEGPVSEVGLEVISQGCRKLQSILFFCQRMTNAAVIAMSKNCPDLVVFRLCIIGRYRPDPETHEPMDDGFGAIVMNCKKLTRLAVSGLLTDQAFRYIGMYGKLLRTLSVAFAGDSDQGLKYVLEGCPNLQKLEIRDSPFGDAALHSGLHHFYNMRFLWMSTCKLTRQGCQEIARALPHLALEVIDSQEDKADDHIEILYMYRSLDRPRNDAPKCVTILQ* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3065 603 Gene3D - 22 68 - -
Amo17g3065 603 PANTHER F-BOX PROTEIN FBX14 21 601 - -
Amo17g3065 603 SMART LRR_CC_2 510 534 IPR006553 -
Amo17g3065 603 SMART LRR_CC_2 127 151 IPR006553 -
Amo17g3065 603 SMART LRR_CC_2 401 425 IPR006553 -
Amo17g3065 603 SMART LRR_CC_2 152 177 IPR006553 -
Amo17g3065 603 SMART LRR_CC_2 461 484 IPR006553 -
Amo17g3065 603 SMART LRR_CC_2 344 367 IPR006553 -
Amo17g3065 603 Gene3D Ribonuclease Inhibitor 70 602 IPR032675 -
Amo17g3065 603 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 21 601 - -
Amo17g3065 603 Pfam Transport inhibitor response 1 protein domain 90 135 IPR041101 -
Amo17g3065 603 SUPERFAMILY RNI-like 56 564 - -
Amo17g3065 603 Pfam F-box 31 69 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3065 Amo-Chr17 134492335 134495557 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3065 - - aprc:113865934 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3065 17 134492335 134495557 Amo17g3065 17 134492335 134495557 ECH