Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3032 ATGGAGAACTCAGATGGGAGGAACGTGGATTGCGTGCGTGTAGCGGTTAACATTCGCCCATTGATCACGTCGGAGCTTCTTCTAGGATGCACAGATTGCATTTCTGTTGTTCCAGGCGAACCTCAGGTGCAAATTGGGACTCATACATTCACCTATGATTATGTTTATGGCAGCACGGGGCCATCTTCGTCTACGATATACGATGATTGTGTAGCTCCGCTTGTTGATGCGTTATTTAATGGCTATAATGCCACGGTTCTTGCTTATGGCCAGACTGGATCTGGAAAAACATACACCATGGGAACAAACTATAATGGAGAGGGAAGTAGTGGTGGAATTATACCAAGGGTATTAGAGAGCATATTTGAAAAGGTTAAGGAAGCAAAGGACTCCATGGAGTTCTTGATCAGAGTATCATTTATTGAGATATTCAAGGAAGAGGTTTTTGATTTGCTTGATCCCAATTCATCGAGAGGAGAAGCAACTTCTGCTTCGAAGCCTGTTGTGCTAGGTAGAGTGCCCATACAAATCAGAGAAACAGTGAATGGAGGAATAACTCTATCTGGTGTGACTGAGGCTGAAGTTAAGACAAAAGAAGAAATGGCATCTTATCTATCAAGTGGTTCGTTATCGCGTGCCACAGGGAGTACAAATATGAATAGCCAATCAAGTCGTTCACATGCTATATTTACCATCACAATGGAGCAAAAGAAAGGTGATGATATCTTATGTGCCAAACTGCATTTGGTAGATCTTGCTGGTTCTGAGCGTGCAAAAAGAACTGGGGCAGATGGCATGCGTTTAAAAGAAGGAATTCATATCAACAAGGGGTTGTTAGCTCTTGGAAATGTTATAAGTGCACTGGGAGATGAAAAAAAGCGAAAAGAGGGAGGTCATGTTCCATATCGTGATAGCAAATTGACACGCCTGTTGCAGGATTCTCTGGGGGGAAACAGCAAAACAGTGATGATAGCATGTGTTAGTCCAGCTGACAACAATATTGAAGAGACACTGAACACCTTAAAGTATGCAAATCGTGCTCGCAACATTCAGAACAAAGCAATTATTAATCGTGATCCAGCTGCAGCTCAGGCACAGGAAATGCGAAATCAAATTGAGCAGTTGCAAGCTGAGCTTCTATTTTATAGAGGTGAAGGTGTGGGACCATTTGAGGAGCTTCAGATGCTTAAACATAAAACTTCGTTACTTGAAGCAAGCAATGCAGAGCTACAACAGGAGCTAAAAAGACGTCGAGTAGCTTGTGAGAGTTTACAACAATCTGCCCTTGAAGCTCAGGTTGAAAGAGACCAGCTGATTATGAAAATAGAAGCTATACGAAACGGTAAATCCTTGGACAAGATTGACTCTAATTCAAATCAGGACTACAACTTGGTAAAATCTTATGTGTCAAAGATCCAATATCTTGAAGGGGAATTGAGACGTTTGAAGACTTCAAACACCACGAATTCAAGACATTTTGTTAACTGTGTTGATTCCGAAGATGATGAACCACTTTCATCTGATAGCCATGCTAAAGCTATGGATTTACCAGATGAATCAGATGATGAAGAAAAGGAGCTAGAACACTCTTCTCTCCAAGAAAAATTGGATAAGGAGCTCAAAGAACTGGACAAAAAACTTGAACAAAAGGAGGCTGAAATGAAGTTGTACAATAACTCTGATCCTTCAATTCTTAGGCAACATTATGAAAGGAAACTTCTTGAGATGGAACAAGAGAAGAAAATTTTGCAGAAAGAAATTGAGCAACTTAAAGAGAATCTTGCAAATATTTCTTCCAACTCTGATGACGGTGCTGAAAAGACAAAGCAGGATTATCTACAAAAGTTGAATGCGCTTGAAGTGCAAGTTTCCGAACTGAAGAGGAAACAAGAAGATCAGGCTATGCTTTTGAGACAAAAACAAAAGAGTGATGAGGCTGCAAAACGACTTTATGATGAAATACAACGAATTAAAGCTCAGAAGGTTCAACTTCAACAAAAGATTAAGCAGGAATCTGAACAATTTAGGTTATGGAAAGCTACACGTGAAAAAGAAGTTCTTCAGCTTAAGAAAGAGGGGAGGAGGAACGAATATGAGATGCATAAGCTATTAGCGTTAAATCAAAGGCAAAAGCTAGTACTGCAAAGGAAGACAGAAGAAGCTTCCATGGCTACCAAAAGGCTGAAAGAACTTTTGGAATCTCGAAAGGCTTCCTCACGTGAATCCATGGGTGTTGGTGGTGGGAGTGCTCCTGGAATTCAGGCTTTGATGAAGGCAATCGAGCATGAGCTTGAAGTTTCTGTTCGAGTGCACGAAGTACGCTCGGAATATGAGCGTCAAATGGAAGAGTACGTGACATTTAGGAGGAATAAAATGGCCTCAGAGATGAGTAAGCTAAAGGAGGAAGTAGAGATGATGAATCAATATGGTACAAGTGATGGCTCTGTGTTAATGTCTCCTGGAGCCAAAAATTCAAGGATTTTTGCCCTTGAAAACATGCTTTCTACTTCTTCTTCATCTCTAGTGTCTATGGCTTCCCAGTTGTCAGAGGCAGAAGAGCAAGAACGGGTTTTTAGTGGTAAGGGACGTTGGAACCAAGTCCGGTCCGTTGCAGATGCTAAGAATGTGATGAATTATCTGTTCAACATAGCATCTTCCTCGAGGTGTTTAGTGCGAGAGAAAGAAATAATCTGCAGAGAGAAGGACATGGAGATTAAAGATTTAAAGGAAAAGGTAGTAAGGTTAAACTATGCAGTTCGACAGTTGGAAATGATAAAAGTTCAACTTACTCGTCAGTTGGAATCACAGAGTGAAACTTTAAAGAGGTATACAGGATCTATGGGAGAAGCAGAATACACTAACATGAATTTGCACAAGCCGGAAAACCGCCATTCTACACATGTACAGGAGGATATATACATGTCTGGTGCAGAATCAGAATATTTTGATGACATGGAAGCAACAGATGACGAGTGGTTTGAGCCAGGAGAATCAACTGAGAATAAACGGAAATCCACAAGCACATACGCAAGCTTAGAGAATATCAACCTTTCAGAACATGATGATAAAGAGTATTCAAGAGATGAACCTGGATGTACATCTGGAGAAATAACATCAAATATTTGCTGCTCTTGTAGTAAAACTTCATCATGTAACACAACAAAATGCAAGTGCAAAACCACAAGAAACAATTGCAGTAGTTCTTGTGGTTGCCTAGCAACCAAGTGTGCTAATAGAGCATCAATCTCAAATGAGTCAACACATCTGGGATCAGTTGAGATGGACAAAGACAACCTTCTTGTTGCTCAAGGTGCAGAGTTACTTCGTGGAGCACTGGTTGATGGGCTTGCCGCAATAGGCCAACAACCTAGAAAGGCTCTTACTGACGTAGGAAATACTTTGGCCAAACCAAAAGCTCAAAAGGGTAATCAGAGAAAGAAATTGCCTAAACCCGCCACAATTGTTGTGTCCGATCCTTCGTCTTCCTTGCAACCCGAGAATTCTGGACCTCCCAAGTCCAAGAAACAAATTGATGACATATTTGATTCAAAAACACTAACTTTGAATATACCACCAAGACTACCCTCCTCTAAGCCTGAACATGCTGCCTCTGCCCCTAGGGTAGAAGGTAATGCCTTGGACCCAGATAACAGTCCTTTAAAATTAAGGGCTGCACGAAGGGCAGCATCATCTAGTGACAGTGATGTTCCGTTGTGGGATAGGAATGCTGGCAAGTTTGATTAA 3744 0.4113 MENSDGRNVDCVRVAVNIRPLITSELLLGCTDCISVVPGEPQVQIGTHTFTYDYVYGSTGPSSSTIYDDCVAPLVDALFNGYNATVLAYGQTGSGKTYTMGTNYNGEGSSGGIIPRVLESIFEKVKEAKDSMEFLIRVSFIEIFKEEVFDLLDPNSSRGEATSASKPVVLGRVPIQIRETVNGGITLSGVTEAEVKTKEEMASYLSSGSLSRATGSTNMNSQSSRSHAIFTITMEQKKGDDILCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDEKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADNNIEETLNTLKYANRARNIQNKAIINRDPAAAQAQEMRNQIEQLQAELLFYRGEGVGPFEELQMLKHKTSLLEASNAELQQELKRRRVACESLQQSALEAQVERDQLIMKIEAIRNGKSLDKIDSNSNQDYNLVKSYVSKIQYLEGELRRLKTSNTTNSRHFVNCVDSEDDEPLSSDSHAKAMDLPDESDDEEKELEHSSLQEKLDKELKELDKKLEQKEAEMKLYNNSDPSILRQHYERKLLEMEQEKKILQKEIEQLKENLANISSNSDDGAEKTKQDYLQKLNALEVQVSELKRKQEDQAMLLRQKQKSDEAAKRLYDEIQRIKAQKVQLQQKIKQESEQFRLWKATREKEVLQLKKEGRRNEYEMHKLLALNQRQKLVLQRKTEEASMATKRLKELLESRKASSRESMGVGGGSAPGIQALMKAIEHELEVSVRVHEVRSEYERQMEEYVTFRRNKMASEMSKLKEEVEMMNQYGTSDGSVLMSPGAKNSRIFALENMLSTSSSSLVSMASQLSEAEEQERVFSGKGRWNQVRSVADAKNVMNYLFNIASSSRCLVREKEIICREKDMEIKDLKEKVVRLNYAVRQLEMIKVQLTRQLESQSETLKRYTGSMGEAEYTNMNLHKPENRHSTHVQEDIYMSGAESEYFDDMEATDDEWFEPGESTENKRKSTSTYASLENINLSEHDDKEYSRDEPGCTSGEITSNICCSCSKTSSCNTTKCKCKTTRNNCSSSCGCLATKCANRASISNESTHLGSVEMDKDNLLVAQGAELLRGALVDGLAAIGQQPRKALTDVGNTLAKPKAQKGNQRKKLPKPATIVVSDPSSSLQPENSGPPKSKKQIDDIFDSKTLTLNIPPRLPSSKPEHAASAPRVEGNALDPDNSPLKLRAARRAASSSDSDVPLWDRNAGKFD* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3032 1247 Coils Coil 891 939 - -
Amo17g3032 1247 Coils Coil 358 385 - -
Amo17g3032 1247 SMART kinesin_4 9 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g3032 1247 Coils Coil 566 607 - -
Amo17g3032 1247 Coils Coil 393 427 - -
Amo17g3032 1247 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g3032 1247 PRINTS Kinesin heavy chain signature 300 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g3032 1247 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g3032 1247 PRINTS Kinesin heavy chain signature 81 102 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g3032 1247 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 8 1244 - -
Amo17g3032 1247 Coils Coil 609 629 - -
Amo17g3032 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 383 IPR027417 -
Amo17g3032 1247 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo17g3032 1247 MobiDBLite consensus disorder prediction 497 518 - -
Amo17g3032 1247 MobiDBLite consensus disorder prediction 497 533 - -
Amo17g3032 1247 MobiDBLite consensus disorder prediction 1137 1247 - -
Amo17g3032 1247 Pfam Kinesin motor domain 43 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g3032 1247 CDD KISc_KIF4 11 351 - -
Amo17g3032 1247 Coils Coil 640 674 - -
Amo17g3032 1247 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 8 1244 - -
Amo17g3032 1247 MobiDBLite consensus disorder prediction 1155 1171 - -
Amo17g3032 1247 ProSiteProfiles Kinesin motor domain profile. 11 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g3032 1247 Coils Coil 714 734 - -
Amo17g3032 1247 Coils Coil 529 560 - -
Amo17g3032 1247 Gene3D Kinesin motor domain 9 383 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3032 Amo-Chr17 133401362 133410606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3032 12 394 Miscellaneous Gene Families AT5G06670 37.215 1.72e-59 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3032 - - lang:109328650 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3032 17 133401362 133410606 Amo17g3032 17 133401362 133410606 ECH
Amo17g3032 17 133401362 133410606 Amo07g1849 07 55359501 55367634 hybridization