Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3002 ATGACGCATTCTCTAACGTCGTCGTTTCATTCCTTCTTTCTTCCTTCTTCATCATCCGTACAACTCAACACACCAAAGCTTCAACTTCTGTTACCAATGTCATCAAATTCTCAACCGCTTCCCCTCAAATTCTCTCACACAAATAGAACAAGAACCACCACCAACAACAACAATCGCCACAAGATTCGAGCTTCGTCCTCAACCGATGATCCTTCACCATCTTCATCAAGTGCGACGAATTTCATTTTTTTTCAGTATGTGGTTGTGTATTTTAGCATATTGTATATCAGATATAGGGCAGGTATTGTAAGTGACGAGATGCTAGCCATTCCGAAACTTCGCTTTCTGGCCATTGGGTTTCTTGAAGCTTTGGGTGTGGCCACTGGAATGTTTGCTGCAGCTGTACTTCCTGGACCAGTCATACCCGTATTGAGTCAGACTTTTTTAGTTTGGCAGCTATTGATTTCTGTTCTTCTCTTGGGGAGAAGGTACTCAATCAACCAATTGGTTGGATGTTTACTTGTAGCTAGTGGAGTTGTGGTGTCTATTACAAGTGGCTCAAACACGGGTCAGATGCTCTCTGAAGTTGAGTTCTTTTGGCCAGCATTGATGATTGTTTCCAGTGCTTTTCAAGCTGCGGCTTCAGTAATCAAGGAGTCTGTTTTCGTTGATAATGCCATTCAATTGAAGCAGAAGTCACTAGATATATTTGTGGTCAATTCTTTTGGATCTGGCTTTCAGGCTCTGTTTGTACTTCTTTTTCTACCTTTACTTTCTAACTTGAAAGGCATACCATTCGTTCAACTTCCTTCGTATCTTAAAAGTGGAGCTGGTTGCTTTCTGAACCTTGGAACTCATAAATCAAGCTGTGACGGTGCTCCCTGGCTTCCCCTGCTTTATATAGTTACCAACTTGGCATTCAATATATCGTTGCTTAACGTGGTAAAAACCTCCTCTGCAGTTGTTGCTTCTCTTATGGTAATGTTATCAGTGCCGATTTCCGTCATCATTCTTTCCCTTCCGTTGCCTTATCTTCCCGAGGGAACAAGCCTGAGCCCAGTTTTTGTAGTTGGCTGCGCCATCCTTGTATCTGGTCTTTATCTGTATAACACAACCAGAGCTGCCAAGAATAGTACTAAATCTGATTGA 1149 0.4221 MTHSLTSSFHSFFLPSSSSVQLNTPKLQLLLPMSSNSQPLPLKFSHTNRTRTTTNNNNRHKIRASSSTDDPSPSSSSATNFIFFQYVVVYFSILYIRYRAGIVSDEMLAIPKLRFLAIGFLEALGVATGMFAAAVLPGPVIPVLSQTFLVWQLLISVLLLGRRYSINQLVGCLLVASGVVVSITSGSNTGQMLSEVEFFWPALMIVSSAFQAAASVIKESVFVDNAIQLKQKSLDIFVVNSFGSGFQALFVLLFLPLLSNLKGIPFVQLPSYLKSGAGCFLNLGTHKSSCDGAPWLPLLYIVTNLAFNISLLNVVKTSSAVVASLMVMLSVPISVIILSLPLPYLPEGTSLSPVFVVGCAILVSGLYLYNTTRAAKNSTKSD* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3002 382 Pfam CRT-like, chloroquine-resistance transporter-like 80 369 IPR013936 -
Amo17g3002 382 PANTHER PROTEIN CLT2, CHLOROPLASTIC 83 375 IPR013936 -
Amo17g3002 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 112 186 - -
Amo17g3002 382 MobiDBLite consensus disorder prediction 40 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3002 Amo-Chr17 132804328 132809349 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3002 - - ccaj:109802647 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3002 17 132804328 132809349 Amo17g3002 17 132804328 132809349 ECH