Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2980 ATGCCCGTTGTTATTACGCATGATCCTATTTTGTTGAATTCCGCTTTTGTCCCCACTCCCATTTCACAGCATCGCCCTGCAATTTTTCCACCATCGCAACGTTCTCCTCCTCGCATTCTTCGCTTCTCTCCTCGCTCAGATATGGATGCTGCTGCAAGTCAAGGTCTTTATCCATTGCACCGTTGTAAAACTCTTCACCTGGTTAGACATGCGCAAGGCTTTCACAATGTAGAAGGAGACAAGAATCCTGATGCATACTTGTCTTATGATCTTTTTGATGCAAACCTAACCCCTCTTGGCTGGAGCCAGGTTGACAATCTGCGAAAGCATGTTAAGACAAGCGATGTTTCTAAAGGAATCGAACTAGTCATTGTTTCCCCCTTGTTAAGGACCATGCAAACAGCAGTTGGGGTTTTTGGTGGTGAAGCATACACTGATGGGATTACTGCGCCTCCTCTGATGAATGATAATGTTGGAGATAGTGGTCGTCCTGCAATTTCTAGTTTGAATTGCCCACCATTTATAGCAGTAGAGCAGTGCCGAGAGCATTTGGGAGTTCATCCTTGCGATAAGAGAAGAAGCATCACTGAGTATCGGAATATGTTTCCAGCTATTGATTTTTCACTGATAGAAAGTGATGAGGACATTTTGTGGAAACCTGACATTAGAGAGACGAATGAAGAAGTTGTTGCCAGGGGACTGAAGTTTTTTGAATGGTTGTGGAAGCGTAAAGAGAAAGAGATAGCTGTTGTTTCTCACAGCGGTTTTCTGTTTCATGCCCTAAGTTCTTTTGGAAATGATTGCCATCCAACTATAAAGAGTGAAATCTGCACACACTATGCAAATTGCGAACTACGTTCTGTTGTTATCATTGATAGAGGCATGATTGGCTCAGATAACCCAACTACCAACTATCCTGGCAAAATTCCTGCTGGTCTTGACCTTCCTAGTGACATTGCTGATGAGAAACTTTCAGGGAATGGGGAAGCGAATTAA 996 0.4327 MPVVITHDPILLNSAFVPTPISQHRPAIFPPSQRSPPRILRFSPRSDMDAAASQGLYPLHRCKTLHLVRHAQGFHNVEGDKNPDAYLSYDLFDANLTPLGWSQVDNLRKHVKTSDVSKGIELVIVSPLLRTMQTAVGVFGGEAYTDGITAPPLMNDNVGDSGRPAISSLNCPPFIAVEQCREHLGVHPCDKRRSITEYRNMFPAIDFSLIESDEDILWKPDIRETNEEVVARGLKFFEWLWKRKEKEIAVVSHSGFLFHALSSFGNDCHPTIKSEICTHYANCELRSVVIIDRGMIGSDNPTTNYPGKIPAGLDLPSDIADEKLSGNGEAN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2980 331 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 46 321 - -
Amo17g2980 331 Pfam Histidine phosphatase superfamily (branch 1) 65 137 IPR013078 -
Amo17g2980 331 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 46 321 - -
Amo17g2980 331 SUPERFAMILY Phosphoglycerate mutase-like 63 293 IPR029033 -
Amo17g2980 331 Gene3D - 59 305 IPR029033 -
Amo17g2980 331 CDD HP_PGM_like 64 135 IPR013078 -
Amo17g2980 331 SMART PGAM_5 64 260 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2980 Amo-Chr17 132324218 132329425 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2980 - - cam:101489637 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2980 17 132324218 132329425 Amo17g2980 17 132324218 132329425 ECH
Amo17g2980 17 132324218 132329425 Amo07g1911 07 56926231 56931053 hybridization