Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2974 ATGGAAGGTTGGGACCCGAACACGAAGTCGACGCTGACGAAGATCCCTCTGCTAGGAACAAAGGCGGGGCCACGCGACGGCGCCGCATGGACGCAGAGGCTGAAGGAAGAGTACAAGGCTCTGATTGCATACACTCAGATGAACAAGTCCAACGACAACGACTGGTTCCGGATCTCCGCCGCAAACCCCGAGGGTACACGGTGGACCGGCAAGTGCTGGTACGTCCACAACCTCCTCAAGTACGAGTTCGACCTCCAATTCGACATTCCCGTCACTTACCCTTCCACCGCCCCCGAGCTCGAGCTTCCTCAATTGGACGGCAAGACACAGAAGATGTATAGAGGTGGAAAGATTTGCTTGACTGTGCACTTCAAGCCACTTTGGGCCAAAAACTGCCCCAGATTTGGCATAGCTCATGCACTTTGCTTAGGCCTTGCCCCATGGCTTGCAGCAGAGGTTCCCATTCTTGTGGATTCTGGTATGATCAAGCACAAAGACGATGCAACCACATCAACTGAATCTTAG 525 0.539 MEGWDPNTKSTLTKIPLLGTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDATTSTES* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2974 174 SUPERFAMILY UBC-like 5 164 IPR016135 -
Amo17g2974 174 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 5 173 IPR014806 GO:0061657|GO:0071569
Amo17g2974 174 PIRSF Ufc1 3 168 IPR014806 GO:0061657|GO:0071569
Amo17g2974 174 Pfam Ubiquitin-fold modifier-conjugating enzyme 1 8 163 IPR014806 GO:0061657|GO:0071569
Amo17g2974 174 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 5 173 - -
Amo17g2974 174 Gene3D Ubiquitin Conjugating Enzyme 1 170 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2974 Amo-Chr17 132168183 132170576 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2974 K12165 - gmx:100499901 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2974 17 132168183 132170576 Amo17g2974 17 132168183 132170576 ECH