Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2938 ATGAGCCGTGAGATCGTTGATCTACGGTCACAAGTTGTGGGAGTGGACGATACATTTTTTTCTTGGAAAATCACGGATTTTGGAGCTCTGAACTTCGATAGTCCTAGCCTAGGAACTGAAATCGGGAAGCTTTCTCCGTCTCATGCGACAGGGGAACCAGATTTAGGAAATCGAAAACTCGCTTGTTTATTTTCTTCGGTTGCGGTAGTTCCAGAAGGAATTGATTGTTCATCAAGTGTAAGTTTACAGGAGATGGATAAAGAGTCTTCTTCGGTTGTTCGGAGCAGCAATAACGTTAACGGCGGAGGTGGGGAAGGGTCTTTGGTGTTAAGGGCGAGTTCCGATGGGACGAGGCACACAACGACGCCGGATTTGGTGTTGCAGTGGGGGAACCGGAAAAGACTAAGGTGCATGAAGGTGCAGGTTAAGGACAAGGACAAAGATGACTCTTCTGCACCGGTCCAGAGGACAACGGTTCGGGTGGATCGCCGGGTCGTTAGAACCGATAAAGACTCTTTAAATAAGCCCCCACTTGGTCTCAATAATAACAATATTACCCTCGCCAATAATAATCATAATCATCATCAAACTAACGGATATCCCAATCTCCGTCAACGCCCATCTTCGCCGCAGCAACGAATTCTCAGGAACTCGGAGACTTCAAGTGCTATGAGAGGAGTAGTAGGAGGGCAGAGCAACGGGGGTGTTAGGGGAATTGCGTCGCCGGATAGGGGTGCGCACGATAAGAGRGGTACGCACAACAACAACAACCACCACCACCATCATCACCATAACGACAATAATAAGTCCGCTGCCTCATCGGATACTGCGCACGATAGCAAAAAGGGTGGGTCACCCTCCGGCAGCGGGGATGCGGTTCCGCAGGTGTGGCCACCTAAGTTCGTGATTGCCTTGACCAACAAGGAGAAGGAAGAAGATTTTTTCGCCATTAAGGGTACAAAGCTCCCTCAGAGACCCAAGAAGAGAGCTAAATTCATACAACGCACCCTCAATCTGGTAAGTCCAGGAGCATGGCTGTCCGATCTTACCTTGGAACGGTACGAAGTTAGGGAGAAGAAGATTTCCAAAAAGAGACCTAGAGGGTTAAAAGCTATGAACAATGTGGAGTCTGACTCTGAATAG 1143 0.4856 MSREIVDLRSQVVGVDDTFFSWKITDFGALNFDSPSLGTEIGKLSPSHATGEPDLGNRKLACLFSSVAVVPEGIDCSSSVSLQEMDKESSSVVRSSNNVNGGGGEGSLVLRASSDGTRHTTTPDLVLQWGNRKRLRCMKVQVKDKDKDDSSAPVQRTTVRVDRRVVRTDKDSLNKPPLGLNNNNITLANNNHNHHQTNGYPNLRQRPSSPQQRILRNSETSSAMRGVVGGQSNGGVRGIASPDRGAHDKRGTHNNNNHHHHHHHNDNNKSAASSDTAHDSKKGGSPSGSGDAVPQVWPPKFVIALTNKEKEEDFFAIKGTKLPQRPKKRAKFIQRTLNLVSPGAWLSDLTLERYEVREKKISKKRPRGLKAMNNVESDSE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2938 380 Pfam Protein of unknown function (DUF1639) 305 354 IPR012438 -
Amo17g2938 380 PANTHER INTEGRATOR COMPLEX SUBUNIT 6 HOMOLOG 93 380 - -
Amo17g2938 380 PANTHER PUTATIVE (DUF1639)-RELATED 93 380 - -
Amo17g2938 380 MobiDBLite consensus disorder prediction 175 228 - -
Amo17g2938 380 MobiDBLite consensus disorder prediction 141 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2938 Amo-Chr17 131592443 131599586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2938 - - aip:107606333 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0892 08 15241667 15247335 Amo17g2938 17 131592443 131599586 hybridization