Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2896 ATGCTTCTCGATGGAGGCGAAACCCCCTCAAGGCATGAATTGCTGAGCATGGTAAAGAAGCACTCTAATTTGATAGGCAAAACGGTAGTGGAGGAGCAAGAAGATGCTTCCGATGTCGAAATGGACATGAAATTCTGGCATGACGTTTTTGATCTGTACTTTGTCCGTGGTAAAGAATCAAGGGGACGCCAAGATGATGATCTCGTTTTCTTTGTCAGGAAATTGGCTTCCCGTGGTTCTGGTTCCAACAACAATGCGGACAATCTTGATCCTTATTTTGTACGCAGGTGGGCACCCGAGTTGAAAAACTTAGTTGATGAAACTTCACTAAATGTGGACTGGAGGCGTTCTTTTTACTTGAATTTGATTGCTCATACATCATTCAGTGTAACTGTTGCAATTTGCAGTTACCAGGTCCTTCAGAATCATCAATCTGGGCAGGATACACCATTATCCCCCGTATACAAGGTTGTAAAGACTGTTTATGCATCTCCAAGTCGAGTAAATTTTCAATTGGACTCCAAAAAGGAAGTGGAGACAACACCTGCTTATCCAGATATATGTTTTGCAATTGATGATTTTGACTCCACCTTTGATACAGTGGTTTTGACTGAAAAAGATCATTGCTATTGTGTAGTTCTTAACGCACATGACGGGGCTGCATTTCCTAGTGAAAAGGGGTCAAACGATTGCAGTACTAGTGACAACTCTTCTCCGAATAGTAGTTCAGCTAAGAAGAAGGATACTAAGCTTACCCTGTTCTCAGGATTTGTCAGCTATCAGATGGTTCGAGATGCTTATGATGCTGGCAAGTCTCGATTTGGGAGCCTTCTATCAGTAGGCCATTATACAGGAAAAACAGATAGGATTTACATGAAAGGTCCCGGAGGTCGAGGGGAAGTTGAAGTAGCTGTTTCTGGTGTTACAGATCAAAGTCAGCAGGACTCTGGTCCATCTTCTCCAGTTATATCAAAGAATGGGTTGGGTCTTGGTGTAATTTTTCGCAGAGCCGCATCAGTTGCAACAGTAGCAGCAAGGCATGCTTATGCAGCTGCCTCTTCCTCTGGTTCTGACTTCGATGAAATGATACCTTTGAAATGCAGCTTAATGTCCATATCATTGCCCTGGGAATATATAGCGTATGATCTTCTGTTCAAGGTGAGGTTTTGCATTGAACAGTTAACGTTAAAATAA 1194 0.4246 MLLDGGETPSRHELLSMVKKHSNLIGKTVVEEQEDASDVEMDMKFWHDVFDLYFVRGKESRGRQDDDLVFFVRKLASRGSGSNNNADNLDPYFVRRWAPELKNLVDETSLNVDWRRSFYLNLIAHTSFSVTVAICSYQVLQNHQSGQDTPLSPVYKVVKTVYASPSRVNFQLDSKKEVETTPAYPDICFAIDDFDSTFDTVVLTEKDHCYCVVLNAHDGAAFPSEKGSNDCSTSDNSSPNSSSAKKKDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLSVGHYTGKTDRIYMKGPGGRGEVEVAVSGVTDQSQQDSGPSSPVISKNGLGLGVIFRRAASVATVAARHAYAAASSSGSDFDEMIPLKCSLMSISLPWEYIAYDLLFKVRFCIEQLTLK* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2896 397 PANTHER ZGC:172139 6 386 IPR019141 -
Amo17g2896 397 Pfam Uncharacterized conserved protein (DUF2045) 43 308 IPR019141 -
Amo17g2896 397 MobiDBLite consensus disorder prediction 224 245 - -
Amo17g2896 397 MobiDBLite consensus disorder prediction 226 245 - -
Amo17g2896 397 PANTHER ZGC:172139 6 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2896 Amo-Chr17 131107824 131112380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2896 - - gmx:100812574 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2896 17 131107824 131112380 Amo17g2896 17 131107824 131112380 ECH
Amo08g0860 08 14834856 14838768 Amo17g2896 17 131107824 131112380 hybridization