Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2886 ATGATAGGTGGTGCATYTGAAGGGTTGGTTTCTTCCCCTAAAATGATTTATGGAGAAGTAATTGAACCTTCAAAGGAAAAGAAGGGAGTGTTGGCACTATGGAGAAGATTAAAATATCAGCTTGTAGAATACAATTCACTGCCAACTTACTTAAGGGACAATGAATACATCTTGGGTTATTATAGATCAGAGTGGCCATTGAAACAGATTTTCCTTAGCATTTTCGCTATTCATAATGAGACACTTAACGTTTGGACGCATTTGATTGGATTCTTCCTTTTCCTGTTTCTAACCATTTACACTGCCATGAAAGCTCCAATGGTTGATTTAAATTCCATAAACTTGCATGAGATGATGGGAAAATCTGATTTGAACAAGATTCGTCTAGAGCTCTTGGATTGCTTGCCAAAATTGCCTAATATGCCTGATCTCCTTAAACTCAAACATGAATTGAGTGCATCTCTCTATCCATTGGACTTTTTAGGATCAGGTTGGAATGCCATGCAAGTTCTCTCCAATTGTTTGCCTGAGCAGTATTCCTTTAATGCAATGAAAGGCGACATGGTATCGATGGAACCGATAACAAGGTGGCCATTCTATGCATTCTTAGGAGGGGCAATGTTCTGCTTGCTAGCAAGCAGCACATGCCACCTTCTTTCTTGCCACTCACAGCGCCTTTCRTACATCATGCTGAGGATCGACTATGCCGGCATTGCAGCACTTATTGCAACCTCATTCTACCCTACAGTCTACTACTCATTCATGTGCAACCCATTCTTCTGCTACCTGTACTTGGGATTCATAACAGTAATGGGCATAGCCACCATTATTTTCTCTCTTCTCCCATTCTTCCAGAAATCGGAGTTCAGGAAGTACCGTGCCACCCTCTTCTTCTTGATGGGGTTTTCAGGGATAGCACCAATAATGCACAAGGTGATAATCCACAAGCATCAACCAGAGGCATTGCAAACGACAAGCTATGAGATATTAATGGGAGTTCTTTATGGTTTGGGAGCTCTAGTATACGCAACAAGAATACCAGAAAGGTGGATGCCAGGGAAGTTTGACATTGCTGGCCACAGTCACCAAATATTCCATGTATTGGTTGTGGCAGGAGCTTACACACACTATCTTGATGGCTTAGTTTACCTCAGATGGAGAGATTCCCAAGGTTGTTAG 1179 0.4173 MIGGAXEGLVSSPKMIYGEVIEPSKEKKGVLALWRRLKYQLVEYNSLPTYLRDNEYILGYYRSEWPLKQIFLSIFAIHNETLNVWTHLIGFFLFLFLTIYTAMKAPMVDLNSINLHEMMGKSDLNKIRLELLDCLPKLPNMPDLLKLKHELSASLYPLDFLGSGWNAMQVLSNCLPEQYSFNAMKGDMVSMEPITRWPFYAFLGGAMFCLLASSTCHLLSCHSQRLSYIMLRIDYAGIAALIATSFYPTVYYSFMCNPFFCYLYLGFITVMGIATIIFSLLPFFQKSEFRKYRATLFFLMGFSGIAPIMHKVIIHKHQPEALQTTSYEILMGVLYGLGALVYATRIPERWMPGKFDIAGHSHQIFHVLVVAGAYTHYLDGLVYLRWRDSQGC* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2886 392 Pfam Haemolysin-III related 75 377 IPR004254 GO:0016021
Amo17g2886 392 PANTHER HEMOLYSIN-III-LIKE PROTEIN 20 392 - -
Amo17g2886 392 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 20 392 IPR004254 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2886 Amo-Chr17 130976433 130979176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2886 K07297 - gmx:100800851 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2886 17 130976433 130979176 Amo17g2886 17 130976433 130979176 ECH
Amo08g0845 08 14625431 14627891 Amo17g2886 17 130976433 130979176 hybridization