Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2883 ATGCTGAGTTCTTTAGTTTGCGGCTTCAATTTGAATCACGAAGAAGAAGATGGGGCATGTCAAAGTAGTTCTACTTCTACCCCAAAGAAGCACTCAAAAAGAAGGGATAATAACAGGGACAAGAATCCATACTCAACACGCGGATTAGACAAGTTTTCTGAACTTCTTGCTGAACTCGATGAGAGAAGGAAGAAGGTTTATTCCAAGATGAACCCTCACGACATATCCTTCGTTCGATTCGCGTATTCCGACAACGATGATTTTGTCCCCATCGTCGTCAAGGTGAAGAACAAAGACCAAAATCATAAGAAGAACAGCAAGAGAGATGATCAAGAAGATGAAAAGCTCAAGGTGAGAGTAAGACACATGACATCTTTCTCGGAGCCAATGCAAAAAACCTCAATAACTAAGGAAAAAGAATCAAAGCAGCAGCAACAACAACAACCCAAGTTGTTGGAATCTGATAACAGGAGCTTGTTGTTCTCTTTGGACAGGATGAAGTATCCATCTTTCTATGTTCCGGCTGTTATGATATTGATTTTGGTGTTCTTGACGGTGTTTGGTAGATCGGTGGCGACACTTTGCACGTGTGTTTTGTGGTATGTAATTCCAGTATTGAGTGATACCTCTTTTTCTTCTTTTTCTTCTTCTTCAAGTTCAAAACCAATAAGAAAAACTGTAAGGAATACAAATAAGAAGGAATATGTGAGAGAGTTGAGTGAAAAAAAGATGGTGGTGAAGGACAATGATTCTCCGAAACATGGCCACCAAAACAGCTGGTGA 783 0.3997 MLSSLVCGFNLNHEEEDGACQSSSTSTPKKHSKRRDNNRDKNPYSTRGLDKFSELLAELDERRKKVYSKMNPHDISFVRFAYSDNDDFVPIVVKVKNKDQNHKKNSKRDDQEDEKLKVRVRHMTSFSEPMQKTSITKEKESKQQQQQQPKLLESDNRSLLFSLDRMKYPSFYVPAVMILILVFLTVFGRSVATLCTCVLWYVIPVLSDTSFSSFSSSSSSKPIRKTVRNTNKKEYVRELSEKKMVVKDNDSPKHGHQNSW* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2883 260 MobiDBLite consensus disorder prediction 129 151 - -
Amo17g2883 260 PANTHER ZCF37 1 256 IPR045880 -
Amo17g2883 260 PANTHER PROTEIN, PUTATIVE-RELATED 1 256 - -
Amo17g2883 260 MobiDBLite consensus disorder prediction 29 51 - -
Amo17g2883 260 MobiDBLite consensus disorder prediction 16 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2883 Amo-Chr17 130956826 130958104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2883 - - adu:107461246 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2883 17 130956826 130958104 Amo17g2883 17 130956826 130958104 ECH
Amo08g0840 08 14570082 14571544 Amo17g2883 17 130956826 130958104 hybridization
Amo16g4162 16 154286720 154287763 Amo17g2883 17 130956826 130958104 PCT
Amo17g2883 17 130956826 130958104 Amo16g4162 16 154286720 154287763 PCT