Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2836 ATGGAAGTGTCAACCATGATGAGCTCAACTGTACAGAATTTGATGAATGTTACCTTCGATTGGCTCAATTCAACTTTAGATGTTCCTTCTGTCCGCGCTGTTGTCTTCGGATTCAACATTCGAGGACATTTGTTCATCGAAGTTTTTCTCCTCGTCGTCATCCTTTTCTTGCTCTCTCAGAAAAGTTACAAGCCTCCTAAACGCCCCTTAACAAACAAGGAAATAGATGAGCTTTGTGATGAGTGGGTTCCAGAACCACTGATTCCTTCTCTTAACAAAGAGTTGCTCTATGAACCACCAGCGCTAGAGAGTGCTGCTGAGCCACATACCATAGTTAATGGTAAAGAAGTTCTCAATTTCACTTCAGCAAACTATCTTGGCTTGATAGGTCATAAAAAGTTGCTGGAATCGTGTACAGCTTCTTTAGATAAATATGGTGTAGGTTCTTGTGGTCCCCGTGGATTTTATGGAACAATTGATGTCCATCTCGATTGTGAAGCAAGAATAGCCAAATTTTTGGGTACCCCTGAGTCAATTCTCTACTCTTATGGATTGTCTACCATGTTCAGTGCAATTCCTGCTTTCTCTAAAAAGGGAGATATAATTGTTGCGGATGAAGGAGTCCACTGGGGAATTCAGAATGGCCTTTACCTTTCAAGAAGCACAGTGGTGTATTTCAAGCATAATGACATAAACTCTTTGAGACAAACTCTGGAGAAAATTACTACAGAAAACAAGCGAGTCAAGAAACTGCGGCGTTATATCGTCATTGAAGCTGTTTACCAGAATTCTGGTCAGATAGCACCCTTAGATGAGATTATTAAACTGAAAGAGAAATACCGTTTTCGTATTTTGCTGGACGAGAGCAACTCAATTGGTGTGCTTGGAAGTTCTGGAAGAGGTCTCACTGAACACTATGGAGTCCCTATCGAGAAGATAGATCTTGTAACTGCTGATATGGGACGTGCATTGGCCACAGAAGGAGGATTCTGCACCGGAAGTACAAGGGTGATAGATCACCAACGACTAAGTAGCTCCGGCTATGTCTTTTCTGCGTCTCTGCCCCCATATCTTGCAAGTGCTGCAATTTCAGCACTGGACATTCTGGAGAAAGATCCCAAACTGATAAAAAAGCTGAAGAATAACATTGCTGTGTTATGGAAAGGATTGTCAGGAATATCAGGCTTGACAATTGCAGGTAGTCAAGAGTCACCAATTGTTTATTTGAAATTGAAGAAGTCAACAGGTTCCATGCAGGAAGACCGACGCCTGCTTGAAGCTATTGCCGAGCGTGTCTTGAAAGAAGATTCAGTATTTGTGGTTGCTTCCAAACGATCAACATTGGACAAATGCCGTTTACCTGTTGGAATTAGATTGTATGTTTCTGCAGGGCATTCAGAATCTGATCTTCGCAAGGCATCTGAATCGTTGAAAAGGGTTGCAAAGCAAGTCCTGGGAGGATCATAA 1467 0.4206 MEVSTMMSSTVQNLMNVTFDWLNSTLDVPSVRAVVFGFNIRGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPEPLIPSLNKELLYEPPALESAAEPHTIVNGKEVLNFTSANYLGLIGHKKLLESCTASLDKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPESILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDINSLRQTLEKITTENKRVKKLRRYIVIEAVYQNSGQIAPLDEIIKLKEKYRFRILLDESNSIGVLGSSGRGLTEHYGVPIEKIDLVTADMGRALATEGGFCTGSTRVIDHQRLSSSGYVFSASLPPYLASAAISALDILEKDPKLIKKLKNNIAVLWKGLSGISGLTIAGSQESPIVYLKLKKSTGSMQEDRRLLEAIAERVLKEDSVFVVASKRSTLDKCRLPVGIRLYVSAGHSESDLRKASESLKRVAKQVLGGS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2836 488 Pfam Aminotransferase class I and II 116 477 IPR004839 GO:0009058|GO:0030170
Amo17g2836 488 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 9 485 - -
Amo17g2836 488 Gene3D Aspartate Aminotransferase, domain 1 110 475 IPR015422 GO:0003824
Amo17g2836 488 SUPERFAMILY PLP-dependent transferases 90 483 IPR015424 -
Amo17g2836 488 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 9 485 - -
Amo17g2836 488 Gene3D - 131 372 IPR015421 GO:0003824
Amo17g2836 488 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2836 Amo-Chr17 130327408 130332176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2836 7 341 Acyl Lipid Metabolism Gene Families AT4G36480 74.925 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2836 K00654 - gmx:100785505 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2836 17 130327408 130332176 Amo17g2836 17 130327408 130332176 ECH