Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2815 ATGGATCATCATGCTCCAGTGACTAGTGGTCTCCTGTTAAAGCTTCCTTTCAGCACTATATTTGAGTATCTTCAGATGCTGCAAATCATTTCAAAGCCAATGAAGGATATCGGCCCACGTGCAATGTTCTATCTTGCTGCTGCAGTATCTGACTTTTATGTTCCTTGGAAGGACATGGTAGAACATAAAATTCAGTCTGGATCTCACATCTTGGATGTGAAACTTGTTCAAGTGCCAAAGATGCTATCAGTGCTTAGAAAAGATTGGGCACCCCTTGCTTTTTGTATATCTTTCAAGTTAGAGACAGATTCAAACATTCTTCTAAATAAGGCGCGGGGTGCTCTCGAGAAGTACAATATGCATGCTGTTGTTGCGAACGAGCTCTCCACGCGCAAGGAGCAAGTGGTGGTTGTCACCATTGACGACAAGATTACAGTTCAACGAGATAAGAGTAAGGCTGATGATGATGTAAAGAATCCCCTCATTAAGCTTCTTTCTCAGAGACATTCAGCTTACATTGAGGATTCTAAGAGAACGAGGTGA 543 0.4217 MDHHAPVTSGLLLKLPFSTIFEYLQMLQIISKPMKDIGPRAMFYLAAAVSDFYVPWKDMVEHKIQSGSHILDVKLVQVPKMLSVLRKDWAPLAFCISFKLETDSNILLNKARGALEKYNMHAVVANELSTRKEQVVVVTIDDKITVQRDKSKADDDVKNPLIKLLSQRHSAYIEDSKRTR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2815 180 PANTHER PHOSPHOPANTOTHENATE-CYSTEINE LIGASE-LIKE PROTEIN 1 178 - -
Amo17g2815 180 Pfam DNA / pantothenate metabolism flavoprotein 26 133 IPR007085 -
Amo17g2815 180 Gene3D - 1 177 IPR035929 -
Amo17g2815 180 PANTHER CORNICHON-RELATED 1 178 - -
Amo17g2815 180 SUPERFAMILY CoaB-like 7 172 IPR035929 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2815 Amo-Chr17 129910462 129912759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2815 K01922 - gmx:100777777 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2815 17 129910462 129912759 Amo17g2815 17 129910462 129912759 ECH
Amo08g0746 08 13213536 13214915 Amo17g2815 17 129910462 129912759 hybridization