Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2802 ATGGGAGTACAAGGCACTTTGGACTATTTCTCTACTTTACTAAGCAGCACCAAAAAGAAGAAGAAGAAGCAAACTCAAACGGTGGCTCTTAAAATCAGAATGGACTGTGAAGGTTGTGCTCGCAAGGTTAAGCATGTCCTTTCCGGTGTTAAAGGAGCTAAGTCTGTCGACATAGATTTAAAGCAGCAGAAGGCAACGGTGACCGGATACGTTGAGCCAAAGAAAGTTTTGAAGGCTGCTCAGTCAACAAAGAAGAAGGTTGAGTTGTGGCCATATGTTCCGTACACAATGGTGGCTCATCCTTATGTCTCTGCTGCCTATGATAAGAAGGCACCRCCRAATATGGTTAGAAAGGTTGCTGACACCGCCAACATAACGGAAACCACCGTTGACGACGGCTACATCCAAATGTTTAGTGATGAAAACCCAAATGCTTGTTCAATCATGTAA 450 0.4378 MGVQGTLDYFSTLLSSTKKKKKKQTQTVALKIRMDCEGCARKVKHVLSGVKGAKSVDIDLKQQKATVTGYVEPKKVLKAAQSTKKKVELWPYVPYTMVAHPYVSAAYDKKAPPNMVRKVADTANITETTVDDGYIQMFSDENPNACSIM* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2802 149 Gene3D - 12 91 - -
Amo17g2802 149 ProSiteProfiles Heavy-metal-associated domain profile. 34 89 IPR006121 GO:0046872
Amo17g2802 149 Pfam Heavy-metal-associated domain 32 85 IPR006121 GO:0046872
Amo17g2802 149 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 24 3 149 - -
Amo17g2802 149 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 149 IPR045181 GO:0046872
Amo17g2802 149 CDD HMA 34 88 IPR006121 GO:0046872
Amo17g2802 149 SUPERFAMILY HMA, heavy metal-associated domain 25 91 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2802 Amo-Chr17 129656487 129657581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2802 - - gmx:100782955 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2802 17 129656487 129657581 Amo17g2802 17 129656487 129657581 ECH
Amo08g0762 08 13410019 13411146 Amo17g2802 17 129656487 129657581 hybridization