Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2794 ATGGCCACCAAGGTTGCGCTTCTTATGTTCTTGTGTGTTCTTCCGGCGATGGTTGCAGCCATCCGCCCAGCAAAGAACCCCTTCTGCGTGCAGGGCCGTGTGTACTGTGACCCTTGCCGTGCTGGTTTTGAGACCTCTGCCACCACCTACATTGCTGGTGCTGAGGTTGTGGTTGAATGCATGGACAAAACCGGAACTGAAGTTGTGTACACAAAGAAGGGAAGGACAGACTCAACTGGATCATACACCATCTACGTCGATGAGGACCACGCCGACCAAATCTGTGACGCCAAGCTCGTGAGCAGCCCTCACCACCGATGCAAGGTGGTGACCCCAGGGCGTGAACAGGCACGTGTTGCCCTTACACGCCAAAACGGCATTGCCTCCGACACCAGGTTCGCCAATGCCATGGGATTCATGACCGAAGATGTTGCTGCTGGTTGTGCCGAGATCCTCAAGCAATACCAGGAGTTTGATAATGAGAATTAA 489 0.5378 MATKVALLMFLCVLPAMVAAIRPAKNPFCVQGRVYCDPCRAGFETSATTYIAGAEVVVECMDKTGTEVVYTKKGRTDSTGSYTIYVDEDHADQICDAKLVSSPHHRCKVVTPGREQARVALTRQNGIASDTRFANAMGFMTEDVAAGCAEILKQYQEFDNEN* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2794 162 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 1 161 IPR006041 -
Amo17g2794 162 Pfam Pollen protein Ole e 1 like 30 112 - -
Amo17g2794 162 ProSitePatterns Pollen proteins Ole e I family signature. 31 40 IPR006040 GO:0005615
Amo17g2794 162 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2794 Amo-Chr17 129400437 129402468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2794 - - gmx:100305566 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2794 17 129400437 129402468 Amo17g2794 17 129400437 129402468 ECH