Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2770 ATGGAGAGATTGAACAGTGGCGCGGGTTCTTCTTCCATTAGGAGGCGCTCACTCAGCGTATCCAGCCACGTCAGCCACCGCACGGAAAACGACGATGACGCCGAGAGCGAGAGCGTTTCAGAAGCCGGTGACATTGGAGATCGCGCACTTCCGAGCAGAAGGTTCAGCGCTACCAACAGCTTCAGGTTCTCCTTCGATGAAACAAAATCAGATGAGAATGGCGGTACTGCTGCTGACGTGGAACAACTGCAACCGCCAAGAGCTTCTTCTGCTATTAGGCCTTTGCCACCTCAGCTCGTAGCTTCTCCTCTTTCCACCACCGATGCAGTTTTGCCTTCTGAAGAACCAAAGAAAGAAACTCGTAAAGGTTTGCCAGAGTTTCTGGACTATGCTTCATGTATGATTCATATGGCTGTTTTCGGAATTCTAGGGGTCTTAACAAGATATTTACTGCAGAAGCTATTTGGCCCTGGGGAAGCCAATTTGACAAGCAACAAAACTGTTCTTTACCTTGATCTTCCTGCTAATATGATTGGTTCATTTTTGATGGGATGGTTTGGTGTTGTATTCAAAACCGACATATCTCAAGTTTCAGAACATCTAGCTATAGCAATAACAACTGGTTACCTAGGAAGCCTTACAACTTTCAGTGGTTGGAATCAGAAAATGCTTCAACTCAGTGTCTCCGGACACTGGCTCTTCGCCATACTCGGTTTTTTACTTGGCTTATTTCTTGTTGGATTTTCCATCATAGTTGGAATTGAAACTGCCAAGGGGTTCAAGTGGCTTCTAAATAAGCTGAATATGTGTTCAGGAAGTGGTAATAACTCTGAGAACTGCAGAGTAGATAGCCCCCAACGTCACTTGGCGGCTATGACGATGTTCTTGGTGATTTTAGGAATATTATGGGGTGTGAGTGGTGCACTGCTGAAGGCTAAGTTCAAGAATGGTGGAAGTGGTGCCGAGTTATGGTTCGCTTGCATGGTTGGACCTGTAGGTGTGTGGATTCGATGGTTCTTAGCTCGGCTCAACGGTCGTGGATTAGGAAGGGCAGGGTTGTTTAAATGGATGCCATTTGGAACTCTCATTGCCAATGTATCAGCTGCTTGTGTAATGGCTGCACTTTCCACCGTAAAGGAAGCAGTCAATACCAAAGATTGTGACACTATTGTAATCGGAACACAGTTAGGTCTCTTGGGGTGTTTGAGTACTGTCTCAACTTTTGCAGCTGAATTCAATGCAATGAGAGAAAGCAATCATCCTTGGAGAGCCTATGTGTATGCCATTATCACAATGTGTGCCTCATTTGTCCTTGGAATCTTGATCTACTGTGTACCTGTTTGGGCAACGGGATATGACACTAGCACATAA 1371 0.4551 MERLNSGAGSSSIRRRSLSVSSHVSHRTENDDDAESESVSEAGDIGDRALPSRRFSATNSFRFSFDETKSDENGGTAADVEQLQPPRASSAIRPLPPQLVASPLSTTDAVLPSEEPKKETRKGLPEFLDYASCMIHMAVFGILGVLTRYLLQKLFGPGEANLTSNKTVLYLDLPANMIGSFLMGWFGVVFKTDISQVSEHLAIAITTGYLGSLTTFSGWNQKMLQLSVSGHWLFAILGFLLGLFLVGFSIIVGIETAKGFKWLLNKLNMCSGSGNNSENCRVDSPQRHLAAMTMFLVILGILWGVSGALLKAKFKNGGSGAELWFACMVGPVGVWIRWFLARLNGRGLGRAGLFKWMPFGTLIANVSAACVMAALSTVKEAVNTKDCDTIVIGTQLGLLGCLSTVSTFAAEFNAMRESNHPWRAYVYAIITMCASFVLGILIYCVPVWATGYDTST* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2770 456 Pfam CrcB-like protein, Camphor Resistance (CrcB) 136 251 IPR003691 GO:0016021
Amo17g2770 456 Pfam CrcB-like protein, Camphor Resistance (CrcB) 325 441 IPR003691 GO:0016021
Amo17g2770 456 MobiDBLite consensus disorder prediction 1 19 - -
Amo17g2770 456 PANTHER BNAC04G47810D PROTEIN 15 452 - -
Amo17g2770 456 PANTHER FLUORIDE EXPORT PROTEIN 1-RELATED 15 452 IPR003691 GO:0016021
Amo17g2770 456 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2770 Amo-Chr17 128952108 128960070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2770 K06199 - gmx:100815204 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2770 17 128952108 128960070 Amo17g2770 17 128952108 128960070 ECH
Amo08g0708 08 12539898 12543374 Amo17g2770 17 128952108 128960070 hybridization