Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2756 ATGGGGAAGTGCAACGGCAGTGGGGTTTATAACTACTTCGTGAACGGCAGGTATGAGGGCGACTGGGTGGATGGCCGTTACGACGGTTACGGGATTGAAAGCTGGGCGCGTGGGAGCCGTTACAGGGGCAAGTATAGACAAGGCTTGAGGCATGGCTTTGGTGTCTACAGATTCTACACCGGCGATTCTTATGCCGGAGAGTGGTGTAACGGTCAGAGCCATGGTGTTGGTGTTCAGACTTGTGCTGATGGCAGCTGTTACATTGGCCAATTCAACTATGGTGTCAAGCATGGACTCGGTTGTTACCATTTTAGAAATGGGGATAGGTATGCAGGGGAGTATTTTGGAGACAAAATCCATGGATTTGGTGTATACTACTTTGCCAATGGACACTGCTATGAAGGAGCATGGCATGAGGGACGCAGGCAAGGTATCGGAACTTACACCTTTCGAAATGCCGACCGGAGATGCGGTGAATGGGATGCTGGCAGCCTCAAGCATCCTCTGCCACCACACTCTGATGCCGTCCTTCGAGCACTTCAGGCTGCAAGGAAAACGGCCGATACCGCGATTAACCTTAGGCGCGTCGACGATGAGGTGAACAAAGCAGTGATAGCTGCTAACAGGGCTGCCACGGCGGCTAGAGTAGCCGCCGTGAAAGCTGTTCAGAACAGAATGGATGGACAATTTTGCGATACTGATGTCTAA 708 0.5184 MGKCNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWARGSRYRGKYRQGLRHGFGVYRFYTGDSYAGEWCNGQSHGVGVQTCADGSCYIGQFNYGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYYFANGHCYEGAWHEGRRQGIGTYTFRNADRRCGEWDAGSLKHPLPPHSDAVLRALQAARKTADTAINLRRVDDEVNKAVIAANRAATAARVAAVKAVQNRMDGQFCDTDV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2756 235 Gene3D - 1 63 - -
Amo17g2756 235 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 2 229 - -
Amo17g2756 235 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 61 163 - -
Amo17g2756 235 Gene3D - 116 174 - -
Amo17g2756 235 Gene3D - 66 115 - -
Amo17g2756 235 Pfam MORN repeat 133 154 IPR003409 -
Amo17g2756 235 Pfam MORN repeat 18 40 IPR003409 -
Amo17g2756 235 Pfam MORN repeat 87 109 IPR003409 -
Amo17g2756 235 Pfam MORN repeat 110 131 IPR003409 -
Amo17g2756 235 Pfam MORN repeat 41 62 IPR003409 -
Amo17g2756 235 Pfam MORN repeat 2 12 IPR003409 -
Amo17g2756 235 Pfam MORN repeat 64 85 IPR003409 -
Amo17g2756 235 PANTHER JUNCTOPHILIN-3-LIKE 2 229 - -
Amo17g2756 235 SMART morn 131 152 IPR003409 -
Amo17g2756 235 SMART morn 108 129 IPR003409 -
Amo17g2756 235 SMART morn 16 37 IPR003409 -
Amo17g2756 235 SMART morn 39 60 IPR003409 -
Amo17g2756 235 SMART morn 62 83 IPR003409 -
Amo17g2756 235 SMART morn 85 106 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2756 Amo-Chr17 128691847 128693380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2756 2 173 Acyl Lipid Metabolism Gene Families AT2G41210 33.721 2.62e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2756 - - qsu:112032123 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2756 17 128691847 128693380 Amo17g2756 17 128691847 128693380 ECH
Amo08g0699 08 12460346 12462314 Amo17g2756 17 128691847 128693380 hybridization