Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2751 ATGAAGCTAAGATCTCCAATTACTCTCCTCTTCCTCTTCTTCATCGCTGAATCTCATGCCATCTGGCTAACCATCCCTACTTCCGGAACCAAGTGTGTCTCCGAAGATATCCAGTCCAACGTCGTCGTTTTAGCCGATTACTATGTTGTCGCTGATGAAGTTGACCATCACCAGATCCACACCGTCTCTCTCAAGGTAACATCTCCTTATGGAAACAACCTTCACCAGAAAGAAAATGTTACCCATGGCCAGTTTGCATTTACAAGCGCCGAGAGTGGGACCTACTTGGCCTGCTTCTGGCTGCAAAACAACCATCAACAACCAACTGTAACTGTTAGCCTTGACTGGAGAACTGGCATTTCTGCCAAGGACTGGGAAACCGTTGCCAAAAAAGAAAAGATTCAGGGTGTTGAACTTGAGCTAAGGAAACTTGAAGCAGCTGTGGAAGCCATCCGCGAAAATCTGATTTATTTGAAGAACAGTGTGGCGGCGGCATTCGCAGCGGTGAGACCCTCCCCAGCTTTGCTCCGAAGTGGACAAAGGCCCAGCGGGCTTTCGTTGAGGTGGGCTTTAGTATCTCGGTGCTCGTCATCATCTTCATCGGAACCTTGTGGAAGAAAATTGGTTCTATACTCAAAGCCCGGATGCTGTTTGTGTGAAGGTCTGAAAGAGAAGCTGCAAGCTGCGTTCTTGCTCTCTGGCCCTGATTCCCTTCACGATGTTCAGCTCCAGATAAGGGATATAACTACCAATCCCCAATGGGAAAGAGCTTATCAATACGAGATACCTGTCTTGGCTAAAGTACTCTCTGATGGCACCGAGGAAACGCTCCCGCGATTGTCTCCGCGTCTAGGAGTGGAACTTGTCCAGAAGAAGATAGCCGCTGCTATGAGAGAATGA 900 0.4844 MKLRSPITLLFLFFIAESHAIWLTIPTSGTKCVSEDIQSNVVVLADYYVVADEVDHHQIHTVSLKVTSPYGNNLHQKENVTHGQFAFTSAESGTYLACFWLQNNHQQPTVTVSLDWRTGISAKDWETVAKKEKIQGVELELRKLEAAVEAIRENLIYLKNSVAAAFAAVRPSPALLRSGQRPSGLSLRWALVSRCSSSSSSEPCGRKLVLYSKPGCCLCEGLKEKLQAAFLLSGPDSLHDVQLQIRDITTNPQWERAYQYEIPVLAKVLSDGTEETLPRLSPRLGVELVQKKIAAAMRE* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2751 299 SUPERFAMILY Thioredoxin-like 207 283 IPR036249 -
Amo17g2751 299 Pfam Glutaredoxin-like domain (DUF836) 207 293 IPR008554 -
Amo17g2751 299 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 13 163 IPR015720 -
Amo17g2751 299 Coils Coil 134 161 - -
Amo17g2751 299 Gene3D Glutaredoxin 203 291 - -
Amo17g2751 299 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 13 163 - -
Amo17g2751 299 ProSiteProfiles GOLD domain profile. 30 143 IPR009038 -
Amo17g2751 299 SMART EMP24_GP25L_2 20 167 IPR009038 -
Amo17g2751 299 Pfam emp24/gp25L/p24 family/GOLD 22 161 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2751 Amo-Chr17 128614357 128618606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2751 K20352 - adu:107460816 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2751 17 128614357 128618606 Amo17g2751 17 128614357 128618606 ECH