Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2728 ATGAATTCCATGCAAACTGAATTTTCAGGGTCTGATTCTGACAGGAACTCGGATGAACTGCATGATGAATTCCCTATGGGACAAAACCAATCCCCTGATATCACATCAGAAGACGTGGCGAGTGCTGAAGATGTCGACGAAATTGTGCGTTCACTTGAAGTCACCTCAAATTTAAGGCACAATGTAAAATATAGTGCATTGGAGAAAGATCAAAATGAAGCAAATGATGATGYAACGAATATAAATGACAGAGATTTAACTTATGGTTTGAGGAACATCTCAGAGAAGCTATCTGCAGCACTTGTGAATGTAAGTGGCAAAGAAGACTTGGTTAAKTTACATGCTGAAGTTGCTGAAGAAGCCATTGCAGGTTGGGAGAAGGCTGAAAAAGAAGTTGCAGGCTTAAAGAAGCAACTCGAGGCGCTAAGTCTCAGAAATTCGGCTTTGGACGATAGAGTTGCGCATTTAGACGCSGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAAGTAAGAGAAGAGAAGGAACAGAATTTCCATGATGCTGTAGAAAACAAAACAAGGGACTTAGAATCTGCGAAAATTGAACTCCAGAGCAAGCTCATTGAGCTCCAAAGTAAATTGGAAGCTTCTAATGCTAGATCTCAATCAATTGATCTTGAGATGTTACATAAGAKTGAAATTTTGGAGAAAGAGAATATGAAACTGAAGCATGAACTCCAAGCTCAATCAGAGGAGCTTGAAATAAGGACAATAGAGAGGGATTTAAGCACGCAAGCGGCYGAGATAGCTAGCAAGCAACATTTAGAAAGCATCAGCAAAGTGGCAAAGCTTGAGGCCAAATGCCGGAGACTGAAGAGCACAGCTTGTAAAGGCTCGGCAGTTAGTGATCATAAATCMATTACATCATCCTCATTTTGTGTTGAATCTCTCACAGATAGTCAATCAGACAACGGGGAGAGGCTGAATKCGGCTGAGATTGATGCCTGCAGGAAGAGTGGCTCAGAAACAGACAAGTGTGAGCCGAGTTCTGATTCATGGGCRGCTGCGCTAATTGCAGAGCTTGATCAGTTCAAGAATGACAAGTGTGGACAAATTCCATCCAGTGCTATTAAAATTGATCTCATGGACGATTTTCTTGAAATGGAACGATTYGCTGCAATGCCTGAGATTACAACTGAAAACTTTAACCAGGAGTCAGTTGTTACTGATCAAAGTACTAACGGAGAAATCTCCCTTGGAGATGAGTTTGACATGATGAACCGTCAGATGAAAGAACTAAAAGAGAAGCTAGATAAGGCGAATGTAGATAAATCTGAGCTGGAGATAGCTTTGATGAAATGCCAMGAGCAGTTCGAGGCCTCGCAACTTCGGCTAAGAGAGGCAGACACAAAATTGAAGGAGCTGCAAAGAGAGCTAGAAARTGCCAACGAATCAGAGCAAATGATAGAAAACCAACTAGCGAGCATGGAAGCCGAGGCACAATCAATAACCAAAAGAGTTCAGTTATTAGAAGCTGAGGTTGATAGAGAACAGGCAATGTCAGATGAAATCGCAATCAAGTGTAAGGTCCTGGAGGAAGAGCTAGAAAGCAAGAAGCAAAATGAGAAATTGTTGTTCAGTGACWTGAAGATCAAACAGGAGGATCTAGCACTGGCTGCAGGGAAGCTTGCTGATTGCCAACAAACAATAGCAGCTTTGGGAAATCAACTAAATTGCTTAGCAGCACTTGAAAATTTCAAGTTGTATTYAAATGACACATAA 1761 0.4134 MNSMQTEFSGSDSDRNSDELHDEFPMGQNQSPDITSEDVASAEDVDEIVRSLEVTSNLRHNVKYSALEKDQNEANDDXTNINDRDLTYGLRNISEKLSAALVNVSGKEDLVXLHAEVAEEAIAGWEKAEKEVAGLKKQLEALSLRNSALDDRVAHLDAALKECVRQLRQVREEKEQNFHDAVENKTRDLESAKIELQSKLIELQSKLEASNARSQSIDLEMLHKXEILEKENMKLKHELQAQSEELEIRTIERDLSTQAAEIASKQHLESISKVAKLEAKCRRLKSTACKGSAVSDHKSITSSSFCVESLTDSQSDNGERLNXAEIDACRKSGSETDKCEPSSDSWAAALIAELDQFKNDKCGQIPSSAIKIDLMDDFLEMERFAAMPEITTENFNQESVVTDQSTNGEISLGDEFDMMNRQMKELKEKLDKANVDKSELEIALMKCXEQFEASQLRLREADTKLKELQRELEXANESEQMIENQLASMEAEAQSITKRVQLLEAEVDREQAMSDEIAIKCKVLEEELESKKQNEKLLFSDXKIKQEDLALAAGKLADCQQTIAALGNQLNCLAALENFKLYXNDT* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2728 586 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 475 580 - -
Amo17g2728 586 Coils Coil 475 534 - -
Amo17g2728 586 Coils Coil 449 473 - -
Amo17g2728 586 MobiDBLite consensus disorder prediction 1 42 - -
Amo17g2728 586 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 10 481 - -
Amo17g2728 586 Coils Coil 416 447 - -
Amo17g2728 586 Pfam Filament-like plant protein, long coiled-coil 223 286 IPR008587 -
Amo17g2728 586 Pfam Filament-like plant protein, long coiled-coil 331 401 IPR008587 -
Amo17g2728 586 Pfam Filament-like plant protein, long coiled-coil 404 575 IPR008587 -
Amo17g2728 586 Pfam Filament-like plant protein, long coiled-coil 107 220 IPR008587 -
Amo17g2728 586 Coils Coil 125 213 - -
Amo17g2728 586 Coils Coil 79 84 - -
Amo17g2728 586 Coils Coil 64 77 - -
Amo17g2728 586 SUPERFAMILY Tropomyosin 415 562 - -
Amo17g2728 586 Coils Coil 226 245 - -
Amo17g2728 586 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 10 481 - -
Amo17g2728 586 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 475 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2728 Amo-Chr17 128071444 128073631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2728 - - aprc:113852503 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2728 17 128071444 128073631 Amo17g2728 17 128071444 128073631 ECH
Amo08g0628 08 11175509 11177678 Amo17g2728 17 128071444 128073631 hybridization