Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2706 ATGAAAATTCTCACTTCTTCAACTTTATTCGTATTAATTTTTCTTTCACCAATAGTTTTATCGGCTAAACAAATTCCTTCTACAGTGTACAATAGTCTCCTGTTCTCAGGCCACAAAGAGAGTGTTCCGCCATCATCTGAAGCCGCCATCAATAAGAGCAACAACGCCACACATCGCACAACAGAATCTGCAGAGGACATCGATGATGGAGAAAACTGTGAATCTTCATGGAATAGGGCATGTTCAGAAGCGGTGCTGAAGGTTGCACGTCAGCCGGAGACAGTGGATTGGCTCCTAAAGGTACGAAGAAGGATCCATCAAAATCCTGAGCTGGCTTTTGAAGAAATCGAAACAAGTTGCTTAATAAGAAAAGAATTGGATCTGATGAGAATTAGTTATCGATATCCACTGGCTAAAACAGGTGTTCGTGCGTGGATCGGCACTAATGGTCCACCTTTTGTTGCCATCAGAGCTGACATGGATGCACTTCCCATACAGGAAGCTGTGGAATGGGAGTACAAATCTAAAGTTGCCGGCAAAATGCATGCTTGTGGACATGATGCACATGTGGCCATGCTTATGGGTGCTGCCAAGATATTGAAAACTCGAGAACATTTGTTGAAGGGAACAGTAATTCTGATATTCCAACCAGCGGAGGAAGCTGGAAATGGTGCAAAGAGAATGATACAAGATGGTGCATTGGAGGATGTTGAGGCTATATTTGCAGTTCATGTATCCCATCAGCATCCAACCGCTATTATTGGGTCCAGGCCCGGCCCATTGCTGGCTGGCTGTGGMTTTTTTAGAGCCGTGATCACAGGGAAAAAGGCCCTCGCCGGCGATCCACACCACTCGATCGATCCGGTTTTGGCCGGTTCAGCCGCTGTGATCAGCTTGCAGGGTATTGTCTCCCGCGAATCCAATCCCTTGGATTCACAGGTTGTTTCTGTGACTTCATTCAATGGKGGCAACAATCTTGATATGATACCAGACACAGTGGTTCTTGGTGGAACTTTCAGAGCTTTCTCTAACACCAGCTTTTATCAACTACTTGAAAGAATTGAGCAGGTGATTGTGGAACAAGCRGGTGTGTATAGATGCTCTGCAGAGGTTGACTTCTTTGAAAAGGAGTACACCATATATCCTCCAACAGTCAATGATGACAAAATGTATGAGCATGTGAAGAAGGTTTCCATTGATTTGCTGGGTCAAACGAATTTCAAGGTAGTTCCACCCATGATGGGTGCTGAAGATTTCTCATTCTACTCCCAGGTGGTCCCTGCAGCATTCTTCTACATAGGGATAAGGAATGAGACATTGGGGTCTACTCACACAGGACACTCCCCACATTTCATGATTGATGAAGATGTTCTACCAATAGGTGCAGCAGCACATGCCACCATTGCAGAGAGGTTCCTCATTGAGTATGGGTGA 1434 0.4512 MKILTSSTLFVLIFLSPIVLSAKQIPSTVYNSLLFSGHKESVPPSSEAAINKSNNATHRTTESAEDIDDGENCESSWNRACSEAVLKVARQPETVDWLLKVRRRIHQNPELAFEEIETSCLIRKELDLMRISYRYPLAKTGVRAWIGTNGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLMGAAKILKTREHLLKGTVILIFQPAEEAGNGAKRMIQDGALEDVEAIFAVHVSHQHPTAIIGSRPGPLLAGCGFFRAVITGKKALAGDPHHSIDPVLAGSAAVISLQGIVSRESNPLDSQVVSVTSFNGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLERIEQVIVEQAGVYRCSAEVDFFEKEYTIYPPTVNDDKMYEHVKKVSIDLLGQTNFKVVPPMMGAEDFSFYSQVVPAAFFYIGIRNETLGSTHTGHSPHFMIDEDVLPIGAAAHATIAERFLIEYG* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2706 477 PANTHER PEPTIDASE M20 FAMILY MEMBER 51 476 IPR017439 GO:0016787
Amo17g2706 477 Pfam Peptidase family M20/M25/M40 155 470 IPR002933 GO:0016787
Amo17g2706 477 MobiDBLite consensus disorder prediction 45 70 - -
Amo17g2706 477 Gene3D Zn peptidases 99 466 - -
Amo17g2706 477 TIGRFAM amidohydrolases: amidohydrolase 99 461 IPR017439 GO:0016787
Amo17g2706 477 Pfam Peptidase dimerisation domain 268 362 IPR011650 -
Amo17g2706 477 Gene3D - 263 382 - -
Amo17g2706 477 SUPERFAMILY Bacterial exopeptidase dimerisation domain 264 373 IPR036264 -
Amo17g2706 477 CDD M20_IAA_Hyd 98 473 IPR044757 GO:0009850|GO:0016787
Amo17g2706 477 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 51 476 - -
Amo17g2706 477 SUPERFAMILY Zn-dependent exopeptidases 93 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2706 Amo-Chr17 127511604 127519329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2706 K21604 - gmx:100785666 743.036