Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2694 ATGGCGGAGGAGAAGAGGCCGTCGTCGTCGTTCGTCAAGAAGAGCGACCGTATGATTTTCACGGTGGACCTTCGCCCGGGAGAGACTACAATCGTGTCGTGGAAGAAGCTTCTCAAAGATGCTAACAGAACCAATGGATCGTCCTCCTCCGAAAAACCCAAGCTCGATGACGTAATTGCTCCGGAACAAGCTTCTGATATTGACGGAAAAGATGCTAATCAGCCGAACCGTTTCAGTGCTGTAATAGAGAAGATTGAGCGCCTTTACATGGGTAAGGATAGTAGTGACGACGAGGATATGCTTGATGCTCCTGATGATGATCAGTATGATACAGAAGACTCCTTCATTGATGATGCTGAGCTGGATGAATACTTTGAGGTTGATAATTCTGCAATCAAACATGACGGGTTCTTTGTAAATAGGGGGAAATTGGAACGCATAGCTGAAGCTCCGGCATTACCTAACCAGCAACCTAAAAAAAGGCGCAGAAAGGAGACACTGAAGAATCCCAGTGAAAAAGATAATGATCGTGTTTCAAATAAACAAGCTAAACTGAGTAAGCCAGCGTTGGAAAAGAAAGCTTCAGTACAGGCAAAGAGTACACTTAATTCCACACAGAATTTAGTTGCACCTGGTGAATCTCATGAAGGGTTGAAATTTCAGAATCAATCTGATGTCACTGGAATTAATTCTAAAAAGAAAAGTGCTGATACTAAACCTGTAATGGACTCTTCTGTCTCTTTGAAAGCATCAAATGATGATATTCATGCTTCTGTGGCAGAAGCAAAAGATGCTGATAAGCAGAAGAAAGGAGTTTCTCAATCTAAGAACATAAGTGATAAATATAAAGATGCTGGTGGCTTGCTTGATCCATCTCATCAGAAATCCCATGAGAAAGGTGCACATGTACATTCTAAAGCCCAACCTGGAAGACCATCAAGTACTATTGGTGATTTGGAGAATACAACTCGGCTGAAAGAAAGAAATGGCATGCGTGAATTGCCGGATCTTAACTTGTCTATAGGAAAGTCTGCTACGCAAGTAACAAAATCTGAACACATGATCAAGAAAGATGGTTCTAGTGTTAGGCCAAAAATTTCAGTGCTGGAAAAGGCTATTCGTGAATTAGAGAAAATGGTTGCCGAGTCAAGGCCACCTGCAGTGGAAAACCAGGAGGCTGATGCTACATCCCAGGCAGTCAAAAGGAGGTTGCCTAGAGAAATAAAGCTCAAGCTTGCTAAAGTTGCTAGACTAGCGCAGTCAAACCAAGGGAAAGTATCAAAGGAGTTAATTAACCGTCTTAATGGTATTCTTGGGCACTTGATTCAGCTTAGAACATTAAAGAGAAACTTAAAAATAATGATCAATACGGGTCTGTCAGCAAAGCAGGAGAAAGATGATAGGTTTCAACAGATAAAGAAGGAAGTTGTTGATATGATTAAGACGCTGGCCCCAACTTTGGAATCCAAGCTAAGAGCTGGAGGTGATCTCAAGAATTTGGTTCTGATGGGAAAATGA 1518 0.4183 MAEEKRPSSSFVKKSDRMIFTVDLRPGETTIVSWKKLLKDANRTNGSSSSEKPKLDDVIAPEQASDIDGKDANQPNRFSAVIEKIERLYMGKDSSDDEDMLDAPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERIAEAPALPNQQPKKRRRKETLKNPSEKDNDRVSNKQAKLSKPALEKKASVQAKSTLNSTQNLVAPGESHEGLKFQNQSDVTGINSKKKSADTKPVMDSSVSLKASNDDIHASVAEAKDADKQKKGVSQSKNISDKYKDAGGLLDPSHQKSHEKGAHVHSKAQPGRPSSTIGDLENTTRLKERNGMRELPDLNLSIGKSATQVTKSEHMIKKDGSSVRPKISVLEKAIRELEKMVAESRPPAVENQEADATSQAVKRRLPREIKLKLAKVARLAQSNQGKVSKELINRLNGILGHLIQLRTLKRNLKIMINTGLSAKQEKDDRFQQIKKEVVDMIKTLAPTLESKLRAGGDLKNLVLMGK* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2694 505 MobiDBLite consensus disorder prediction 286 305 - -
Amo17g2694 505 MobiDBLite consensus disorder prediction 196 252 - -
Amo17g2694 505 MobiDBLite consensus disorder prediction 89 112 - -
Amo17g2694 505 MobiDBLite consensus disorder prediction 147 336 - -
Amo17g2694 505 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 494 - -
Amo17g2694 505 Pfam HPC2 and ubinuclein domain 103 145 IPR014840 -
Amo17g2694 505 MobiDBLite consensus disorder prediction 41 77 - -
Amo17g2694 505 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 1 494 - -
Amo17g2694 505 MobiDBLite consensus disorder prediction 156 181 - -
Amo17g2694 505 MobiDBLite consensus disorder prediction 256 277 - -
Amo17g2694 505 MobiDBLite consensus disorder prediction 98 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2694 Amo-Chr17 127322647 127329390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2694 - - gsj:114415452 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2694 17 127322647 127329390 Amo17g2694 17 127322647 127329390 ECH
Amo08g0666 08 11842506 11848894 Amo17g2694 17 127322647 127329390 hybridization