Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2596 ATGGGTTTGCTGGATATTCTGTGTTCTTCTGTATTTCTGTTTACACTGGTTGAGGCCACCAGCAGATCAGGGAATATCTGGCCCCTCAATGTTGGTGCTGAGTCCACGGGAACAGTAAGCTGGACAGTCTTCACTGCAAGTATATTTGTACTTGTTGCTCTTGTTCTCTCAACGTATCTGATATTTGAGCATTTAGCTGCCTATAATCAGCCTGAGGAACAGAAGTTTTTGATTGGTCTCATTTTAATGGTTCCTGTTTATTCATTGGAATCGTTTTTGTCACTATTGGATTCCAGCGCAGCATTTAACTGTGAAATTATAAGGGATTGCTACGAGGCATTTGCATTATATTGCTTTGAAAGATACTTGATTGCTAGCTTAGGTGGTGAGGACAAAACAATTGAATTTATGGAAGGTAAGAGCCCAGCAGATTCCAACACTCCTCTCCTGAAAGAAGAATATGCATATGGGGTCGTAGAGCATCCATTTCCATTAAACTGCTGTTTAAGAGATTGGTATCTTGGCCCCGACTTCTATCAGTCTGTGAAAATTGGCATTGTACAATATATGATACTAAAAATGATCTGTGCATTGCTGGCAATGATCCTCCAGGCTTTCGGGGTTTATGGAGAGGGGAAGTTTGAATGGAAATATGGGTATCCATACTTGGCAAGTATTCTTAATTTTAGTCAGACGTGGGCTCTATATTGCCTTGTACAGTTCTATACTGTCACTAAAGATAAACTGGAGCCTATCAAACCATTGGCAAAGTTTCTAACTTTCAAGTCAATTATCTTTCTGACATGGTGGCAAGGTGTGGCTGTTGCTTTTCTTTTTTCCATGGGAGCATTTAAAGGGGCACTTGCTCAAGAGCTGAAAACACGTATACAAGACTATATAATCTGTATAGAGATGGGCATTGCTGCTGTTGTGCATCTTTATGTCTTTCCTGCGACACCATACAAGAGGGGAGAGAGGTGTGTACGCAATGTAGCGGTCATGGCTGAGTATGCATCCCTAGGATCACCTCCAGATCCAGCAGAGGTCCGAGACGCCGAGCGAACACCCAGAGTGCATCTGGGTCGACAAGATGAGAAAGAGAGGCGTGTGAAGTTCACCCATAATGTTCGTGATGTGGTTGTTGGGAGCGGTGAAATTATTGTTGATGACATGAAATTCACAGTATCGCATGTGGTAGAACCAGTTGAAAGGAGCATTGCAAAGATAAACAAAACCTTCCATCAGATATCAGAAAATGTGAAACGCCACGATGAGGAGAGGAGGAGAAGCACAAAGGACGACAGTTATGTCGTTCCGATGCGTTCATGGAGAACAGAGTACTCTGATGTTCATGATGGACTAGTGGAAGGAAGTGTGAGTGATAGTGGTATGCCCAGTGGGAAGAGACAACAACACTCCAAATACTCCGCCTCCAGGATGAAAAGATAG 1449 0.4293 MGLLDILCSSVFLFTLVEATSRSGNIWPLNVGAESTGTVSWTVFTASIFVLVALVLSTYLIFEHLAAYNQPEEQKFLIGLILMVPVYSLESFLSLLDSSAAFNCEIIRDCYEAFALYCFERYLIASLGGEDKTIEFMEGKSPADSNTPLLKEEYAYGVVEHPFPLNCCLRDWYLGPDFYQSVKIGIVQYMILKMICALLAMILQAFGVYGEGKFEWKYGYPYLASILNFSQTWALYCLVQFYTVTKDKLEPIKPLAKFLTFKSIIFLTWWQGVAVAFLFSMGAFKGALAQELKTRIQDYIICIEMGIAAVVHLYVFPATPYKRGERCVRNVAVMAEYASLGSPPDPAEVRDAERTPRVHLGRQDEKERRVKFTHNVRDVVVGSGEIIVDDMKFTVSHVVEPVERSIAKINKTFHQISENVKRHDEERRRSTKDDSYVVPMRSWRTEYSDVHDGLVEGSVSDSGMPSGKRQQHSKYSASRMKR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2596 482 MobiDBLite consensus disorder prediction 454 482 - -
Amo17g2596 482 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 13 474 - -
Amo17g2596 482 Pfam Organic solute transporter Ostalpha 43 321 IPR005178 -
Amo17g2596 482 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 13 474 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2596 Amo-Chr17 125121533 125126224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2596 - - gmx:100804401 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2596 17 125121533 125126224 Amo17g2596 17 125121533 125126224 ECH
Amo08g0584 08 10687802 10692954 Amo17g2596 17 125121533 125126224 hybridization