Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2569 ATGGCACTGAAGCTGAGAGTGTTACCTTCACTTCAATTAAGCACTGCTCTCCCTACGTTATCATTCTCACTCTCACAACCACGTTCTCTTGGTTTTCGTGCATTGCGGTCACACCCAAACACCATAGCCACACCTGCATCACCAACGAGACTAATGATTCGTGCTGCTAGAACCGAGGCCAAAGCTGCAACCTTGGGCTCCAGAGCACCTCAATTTCAGCTTCCAGAGCCTCTTACTGGTAAAGTTTGGTCATTGGAGGATTTTGAAGCATATCCAGCTCTATTGGTTATGTTTATATGCAATCATTGTCCATTTGTTAAGCATCTGAAAAAGGATATTGTAAAGCTTACGAATTTCTATATGGAGAGAGGACTTGCGGTGGTTGCCATTTCTTCGAATTCCGTAGCCACTCACCCCCAGGATGGACCGAAATTCATGGCAGAAGAAGCTAAGTTGTTTAGCTATCCTTTTCCATACTTGTATGATGAGTCACAGGATGTTGCACGAGATTTTGGAGCAGTTTGTACACCTGAATTTCTCCTCTACAAAAAGGATGGTCGGAGGCCGTTTGAGCTGGTTTATCATGGTCAGTTTGATGATTCACGACCAAGTAATAATGTACCAGTGACAGGAAGAGACTTGAGCTTAGCAATAGATCGCGTTTTGAGTGGCCAGCCAGTACCTTCAGAGCAAAAGCCTAGTGTTGGATGCAGCATAAAGTGGCACCCATAG 732 0.4481 MALKLRVLPSLQLSTALPTLSFSLSQPRSLGFRALRSHPNTIATPASPTRLMIRAARTEAKAATLGSRAPQFQLPEPLTGKVWSLEDFEAYPALLVMFICNHCPFVKHLKKDIVKLTNFYMERGLAVVAISSNSVATHPQDGPKFMAEEAKLFSYPFPYLYDESQDVARDFGAVCTPEFLLYKKDGRRPFELVYHGQFDDSRPSNNVPVTGRDLSLAIDRVLSGQPVPSEQKPSVGCSIKWHP* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2569 243 CDD PRX_like1 66 241 - -
Amo17g2569 243 Pfam AhpC/TSA family 66 182 IPR000866 GO:0016209|GO:0016491
Amo17g2569 243 Gene3D Glutaredoxin 50 243 - -
Amo17g2569 243 ProSiteProfiles Thioredoxin domain profile. 63 223 IPR013766 -
Amo17g2569 243 PANTHER OS07G0260300 PROTEIN 33 243 - -
Amo17g2569 243 SUPERFAMILY Thioredoxin-like 63 243 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2569 Amo-Chr17 124546353 124549109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2569 - - gmx:100780633 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2569 17 124546353 124549109 Amo17g2569 17 124546353 124549109 ECH
Amo08g0592 08 10759282 10762013 Amo17g2569 17 124546353 124549109 hybridization