Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2539 GTCAAGATAGTAAAGTTCATAGTAGAAAATTTTGTAGTGGACATATCTTTTAATCAGCTTAGTGGCTTATGTACACTTTGTTTTCTTGACGAGGTTGACAACCTGATAGGACATAATCACTTGTTCAAAAGGAGTGTGATATTGATAAAAGCTTGGTGTTACTATGAGAGCCAAATCTTGGGAGCATATTATAGATTAATGTCAACCTATGCACTCGAAACTTTAGTCATATACATATTTCATGTTTACAATAAGCCATTTTCTGGCCCACTAGAGTTCTTTAACAAATTTGATTGGGATAACTATTGCATTAGCTTGTGGGGACCAGTGCATAAAGAGTGTGTTCCGAAGATGATGAGAGCGGAAGCTCCAAGAGGGGATAGGGAAGTGTTGCTGCTGAGTGAAACGTTTCTGAGAAGTTCTATAAGCTGTTACAGTGTGCCAAGAATCAATGAAAACAATAACAATGTTGAAGAGCAACCTTTTTTTTTCAAATGCATCAATATTGTTGATCCCTTGCAAGAGAATGTGATAGCAGAATTTGATTCCTTCTTCAAGAACACATGGAACAGAAGTGGCAAAGGTTACTGGATACCATCATTTCATGAGAATAATAATTCTTCATCAAAACATGTCAATGAAATTGGAACCTCTTTTGATGCTGCACCATCATCATGGAGCTCAAAGGATCACACAAATAATAATAATAATAATAATGCAGCCATGGTTACTGATCAAGGTTCTCATCATCATCATTCTTCTTCAATGAATGAATCAGGAGATAGTGCTTCAAATGTTATCATCAACAATGAACTTTCCGGTGTTAACATGCCTTGCTCTAACCCTGATGCACTACCTCTGTATCTTCTTGAGCAACAAATCAATAATTTGAAGCTAGGTAACAACAATAATGATGATAATAATAATAATAATCTCCAAGCTCAACAAGAAAAGAGTGATAACCAAGGCTTATTACCTGGTCCAATTAATAGTAATAATAATAATGTGACACCATTTTCATTCCCTATGGCTATGAACATGGAAAGTACATTATTAGTTGATGTTTTGGAGGGTGATTTTGCAAGCCATTGGAAGAACATGCAGAATGCAAGACTAAGTTTAGATGGAAACTTGCAGGGTCCATTTTGTAGTTCTAGTTCACCTGTAATACCACCACTTCAGTCACAATTATTGTTGGGAAATTTTCCTCTTCTTACTTGTGCTGGTATTGTGCCAAATATGATGCTACCTGCTTCTGGTAACATGAGTCAGAGTCATCCTTTGCTTCCTATGATGCAAAATTCTGGACCCAATTGTGATAGTGTTCCATTTGGTTTTGGTGAGCATCCAAGACATCATAAACTTGGGACTGGGACATTTATTCCAGATCCAGAGAGTTACAAGCAAAGGGTTAAATTTCATGCAAGAAAGCGTAATTATGACCGTCCTAGGGAAGGTAGGTTCAATTACGAATATGAAAGGACAAATAGTGGTGGTGCTGACTATAATTATAGGAACCTTGTATGGAAGCCAGTGGAGATTAAGCGTACAAATTCTGAAAAGGATTTTGCACATTCTTCTTCTAATCAGCCATCATCCCCCAATATTAGCGGGGTTAATATGAAAGACTCTACCTCTCAATGA 1644 0.3686 VKIVKFIVENFVVDISFNQLSGLCTLCFLDEVDNLIGHNHLFKRSVILIKAWCYYESQILGAYYRLMSTYALETLVIYIFHVYNKPFSGPLEFFNKFDWDNYCISLWGPVHKECVPKMMRAEAPRGDREVLLLSETFLRSSISCYSVPRINENNNNVEEQPFFFKCINIVDPLQENVIAEFDSFFKNTWNRSGKGYWIPSFHENNNSSSKHVNEIGTSFDAAPSSWSSKDHTNNNNNNNAAMVTDQGSHHHHSSSMNESGDSASNVIINNELSGVNMPCSNPDALPLYLLEQQINNLKLGNNNNDDNNNNNLQAQQEKSDNQGLLPGPINSNNNNVTPFSFPMAMNMESTLLVDVLEGDFASHWKNMQNARLSLDGNLQGPFCSSSSPVIPPLQSQLLLGNFPLLTCAGIVPNMMLPASGNMSQSHPLLPMMQNSGPNCDSVPFGFGEHPRHHKLGTGTFIPDPESYKQRVKFHARKRNYDRPREGRFNYEYERTNSGGADYNYRNLVWKPVEIKRTNSEKDFAHSSSNQPSSPNISGVNMKDSTSQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2539 547 Gene3D - 16 177 - -
Amo17g2539 547 MobiDBLite consensus disorder prediction 520 547 - -
Amo17g2539 547 MobiDBLite consensus disorder prediction 523 547 - -
Amo17g2539 547 MobiDBLite consensus disorder prediction 299 331 - -
Amo17g2539 547 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 176 - -
Amo17g2539 547 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 174 534 - -
Amo17g2539 547 MobiDBLite consensus disorder prediction 221 250 - -
Amo17g2539 547 SUPERFAMILY PAP/OAS1 substrate-binding domain 41 175 - -
Amo17g2539 547 MobiDBLite consensus disorder prediction 221 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2539 Amo-Chr17 123850913 123854957 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2539 - - adu:107460535 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2539 17 123850913 123854957 Amo17g2539 17 123850913 123854957 ECH
Amo08g0495 08 9180859 9182477 Amo17g2539 17 123850913 123854957 hybridization