Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2513 ATGCCGCGCAGCTCAAAACACAAATCTAGCAAGCACAGCTCGAGGGACGCCAGGGAGTACTCTGACTCCGAGAGGGATTCTGGCTTCAAGGATCGGAAGAGCAAGGACGACGGCGCCGCCATCAAGCCGTCGAAGGATTCAAGCTCCGCCGAGAAGCGGAGGCTGGATTCGAGAGGTGACGGAAAGGAAGTTCACGGCTCCGGCAACGGGGATTACTCCGACGAGTATGCTTCATCTTCGAAGCGCCGCAAGGATGGTGGAGGGGGAGAGCGGTGGAACGGAGGCGATGATGACCGCGGAGAGGGGTCGAGGAAGTCAAAGGCTGTGTCGGGAGATTCGAAAAGTAGGAGGAGGGATGGGAGTGTGGGAGCTTATGGAGAGGGCGAGGAGGGAAAGAAAAGCAGTGGAAAGGGCGAAGGGAAGCACAAGGATTCGTCTTCGGGGCGGAGAGAGAGCAGGGAAGGGTGGTCGGAGAAGGAGAGGAAGTCCAGAGGAGAAGGTAGGAGCGAGGATTCGGTTGATGAGGAAGAACAGCGCGCGCCAAAGCATGGGTTTGAAAATAATGACTCAATGAAAATAGATGATCTGCAAAGTCCTGAATTGGATAACCAGCTTGAGAGGAGAATGAGGAAGAAAAGGGATGAATATGGTGATAGTGATAAGCACCAAGATGAAATTGGGGATGGTTATGACAGGCATTTGTCCTCTAGAGATGACAAAGATGGAAAGAAGAAGGATGATAGGAGAAAAGATGAGAAACATAGAGACAAGTATAGGGATGAGATGGAAAGGGAGAACAAACATCGAAATGAAAAGCAACGAGATGAGCGCCCTTCAAAAGATCATAATAGCATTAGATCTGATGAGAAACATGGTAGGGAAGAGAAGCATAATTTAGAATCACGACAAAAGAGAACCAAACTTCCAGAGAGTGACCGGAACCATTATCGTGATCGTGATGCGGACCGTGATTCAGAATCTGTTCGTGAGCGTGAGCGTCACAGTGAACGGGAATCTGATCGCGATCGTGATTATGATCTTGACAGAGATCGTGATTATGACAGAGATCGAGATTGGGAATGGGATCGTGAACGAGACAGAGACCATGATCGTCACCGTGATCGTGATGGGTCACATGTGGATGACAGAACTGGCAGAAGCAAAGAGGGTGGGACAAAGAAAAGAACTTTGGATGATCGTGATGGTTATACTGATTCTAAATCTAGAGTTGTTAAGAGCCATTATTCTGATGCTGAGAAGAGGAGTTTGAGCAGCAGTAAAGCTGATTCTGATGTAGACAGGGGAAGATCCCAACCTCGGCAAACTCATCCTGATTCAATTGGGACTAGCAATAGACACAGATCACCTAGCACGCACATTGGCAAGGATGAACATAGAAATGCAAGTGGTGAAGATTCAAAGTATAGGGACTTAACAATGGAACAGAGAACCAAAGGCTCAAGAGAGGTTTACTCTGGGATATCAGAGAGAGGCCCTAAATACAAATTAATGGAAAAACCCAATAAAATGGATGAAGGTTCTGTAGGAGACCTGCCAACTGAAAGGTCTTCTAGTGCCAAGGTTTCACCCATGGGACTGAGGGAAAGATCTCCTTCATCTACAAGCATTGAGCGCAGGTATCCTAATAAAAGCAATGCTAAGCGAAATCATGAAACTGATGAAAGTGGAAGGAAGAACAGTGTTGATGATGATAGACCTGGTCGGGAGTCGACTGTAGAGAAATCACTATTGGATGAGCCATCTCAAGCAGACTCATCTTTATATGGAAGGACCAGTCAAAGCAATTCGTCAATGATTCCACCTGCACCTGCCTTTAGGGCTGCGTTAGAGAGACCATATATGGGTTCATTAGATGATGATGTTAGAGATAACTCCAATAATCGATACAGAAGAAGTAGTGAGCCTGGTTTTGGAAGATTGCATGGTGGCAATTCATGGAGGGCAGTACCAAACTGGAATTCACCTGTACCGAATGGATTTGTTCCATTCCCACCTGGGCCAGCACATGGAGGTTTTCAAGCAATGATGCCACAGTTTACATCTCAGCCTCTCTTTGGTGTTAGGCCTGGAATGGAGGTTAACCATGCAGGCATTCCTTACCATATTGCTGATGCTGATAGATTTCCAGGTCACTTGCGTCCACTTGGGTGGCAGAATTTGATGGATGGAGCCGGACCTGCTCATTTGCATGGATGGGATGGTAATAATGGTGTCTTCAGAGATGATCCTCACATGTACGGTGGTTCTGATTGGGACAGGAATAGACATTCAACAAATAATCACGGATGGGAAGCTGGTTCGGAGACTTGGAAGGAACAGAATATTGACTCGAAGAAGGAGTTGCCTTCCCCAGCCTGCAAAGATGAATCAGGTCCACCCCTGATTGATAATGGTTTGACTGATCAGACTACTCAGATGTCTCATGATGAACCCAACAAGGATGAATTTGATGAGAAACCTCCTGGGACAAAGTTTTCCAGTCTCAGTTCTCCAGCAAAAGTTACTGTGAACACGGCTGGTCTTGAAAATGTGCCTGATGTTTCAACACCAACACCAAGTGACAATACCTCTCTTTTGAGCCGTTTCTACCTTTCCAAGCTTGACATTTCAGTGGAGTTGGTTCAGCCAGATTTGTATGACCAGTGTATGTCTGCTCTAAATGTTAACAAGAATGCACCGGTTGATGCAGATGCTAGTACAGAACTGTCCTTGAAGAATGCTTCTGGAGCACGACTGAAATATTCAGCCACTATATCAAGGCATTTTCCTTTCCCAGTAATTGATAATTCTATCTTCCAGAAAGCAATAGACCTTTACAAGAAGCAGAGGGGGGTGAAACTGCCTAATGGGAATGAGGTAGATATTGCTGCCGATTCCAACCAGATGCAAGTGGATGAGTCGGTTCCTATTCCCAGTTTAGAGGATAGGCAGGTTTCTGTATCAGCTTCTGATGGAACAAAAGATATGCCGATCCCGACAGAAGAACAAGAGAAAGTAGAAATCCTTTCTTCTCCAAAGGAGCATCTGGAAGAGATCAATAATACCAGCAGTCAAATGGAGCAAGATGATGACGGTACCCACTCTTTAAACACTGGCATGTCTGGTCCATCTGCAGAGCATGAGAACCAAGAAGCCTTAGCTGGTTCCTGTGAAAAAGAGGAAAAAATCACCTCTGATAATGCCCATTCCGGAGATGCGAATGAAAATCACTCCATTGCATCTGAGAATGAAGCTCAGCCAACTGCCACTTTGCTTGAAGATGGTGATGATATGAATAGCGAAGTTAAATCTGTTGATGCCCATTGTGCAGATGAAAAACTGAGCTTTGATGATACAAAGGTTAATCCCTTAAATTTTGAGGATAGGTCTCCCAAAGCTTGTGATGCTTTGATGCCCGGTTCAAATGAGTCTGAGTCGCTAATTTTAAGCCGGATACATCATTCTCCTGAAAGTACACATTGA 3483 0.4577 MPRSSKHKSSKHSSRDAREYSDSERDSGFKDRKSKDDGAAIKPSKDSSSAEKRRLDSRGDGKEVHGSGNGDYSDEYASSSKRRKDGGGGERWNGGDDDRGEGSRKSKAVSGDSKSRRRDGSVGAYGEGEEGKKSSGKGEGKHKDSSSGRRESREGWSEKERKSRGEGRSEDSVDEEEQRAPKHGFENNDSMKIDDLQSPELDNQLERRMRKKRDEYGDSDKHQDEIGDGYDRHLSSRDDKDGKKKDDRRKDEKHRDKYRDEMERENKHRNEKQRDERPSKDHNSIRSDEKHGREEKHNLESRQKRTKLPESDRNHYRDRDADRDSESVRERERHSERESDRDRDYDLDRDRDYDRDRDWEWDRERDRDHDRHRDRDGSHVDDRTGRSKEGGTKKRTLDDRDGYTDSKSRVVKSHYSDAEKRSLSSSKADSDVDRGRSQPRQTHPDSIGTSNRHRSPSTHIGKDEHRNASGEDSKYRDLTMEQRTKGSREVYSGISERGPKYKLMEKPNKMDEGSVGDLPTERSSSAKVSPMGLRERSPSSTSIERRYPNKSNAKRNHETDESGRKNSVDDDRPGRESTVEKSLLDEPSQADSSLYGRTSQSNSSMIPPAPAFRAALERPYMGSLDDDVRDNSNNRYRRSSEPGFGRLHGGNSWRAVPNWNSPVPNGFVPFPPGPAHGGFQAMMPQFTSQPLFGVRPGMEVNHAGIPYHIADADRFPGHLRPLGWQNLMDGAGPAHLHGWDGNNGVFRDDPHMYGGSDWDRNRHSTNNHGWEAGSETWKEQNIDSKKELPSPACKDESGPPLIDNGLTDQTTQMSHDEPNKDEFDEKPPGTKFSSLSSPAKVTVNTAGLENVPDVSTPTPSDNTSLLSRFYLSKLDISVELVQPDLYDQCMSALNVNKNAPVDADASTELSLKNASGARLKYSATISRHFPFPVIDNSIFQKAIDLYKKQRGVKLPNGNEVDIAADSNQMQVDESVPIPSLEDRQVSVSASDGTKDMPIPTEEQEKVEILSSPKEHLEEINNTSSQMEQDDDGTHSLNTGMSGPSAEHENQEALAGSCEKEEKITSDNAHSGDANENHSIASENEAQPTATLLEDGDDMNSEVKSVDAHCADEKLSFDDTKVNPLNFEDRSPKACDALMPGSNESESLILSRIHHSPESTH* 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2513 1160 PANTHER LOW PROTEIN: ZINC FINGER CCCH DOMAIN PROTEIN 1 1160 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 548 582 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 1 350 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 364 440 - -
Amo17g2513 1160 PANTHER OS05G0595500 PROTEIN 1 1160 - -
Amo17g2513 1160 Coils Coil 255 275 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 499 516 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 754 838 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 1143 1160 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 1121 1160 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 456 484 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 997 1014 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 963 1102 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 441 455 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 623 647 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 1015 1045 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 76 350 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 583 607 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 1069 1088 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 364 607 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 814 828 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 12 69 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 1052 1068 - -
Amo17g2513 1160 MobiDBLite consensus disorder prediction 778 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2513 Amo-Chr17 123134779 123141999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2513 K22909 - gmx:100814864 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2513 17 123134779 123141999 Amo17g2513 17 123134779 123141999 ECH
Amo08g0466 08 8812898 8820369 Amo17g2513 17 123134779 123141999 hybridization