Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2480 ATGGTGACGGATCCGGAGCTGATCAAATACGTYTGCATTGCAAGGGCCACCACCGTCCTGGCCCACCGCCGCGCCACCACCGCCGATCCCGACGTCGAGTGCCTCGCTTCCAAATGCATCGCTCTGGCACCTCCGAARCACTCTCTCTTCACCCAAACCCTAAAACGCCGCTCTTACACCTTCCTCATAGACCCTCCCTTCGTCTTCTTCGCCATCTTTGACCACCGGTTAATCAAGCCCTTCCAGCTCCGCTTCCTCCACCGCCTCCGCGACTCCTCCTCCGCCTTCCTCCGATCCCAACCCCCAACCAAAGATGATGACTTTGTAGCGTTCTGRTTTCAGTCCCAATTCGATTCCATATTCGGCGAAACGCTCYATTTCGAATCAGGGGGGACCGACGCKGCCCCCGTTTCGAGAAGCCCWAMCGTGGAATCTCCATCCACCGCCGCCAACAAGATAGGGAGGTCGCCGTCGACGGTGCCGCTKCTCGGGAAGCCACAGGAGGGGATGTTGTTGAAAAAGAAGAAGAGGGTGGTGGAGGCCGTCAARGGAGAAGTCAAAGACGGTGMRGGCTCGCCGGAGAACAAGGTGGACGTMTGTTCCGACGAAGRKAACGGCGGCGGCGGAACAAGGGACTTCTCGCTAGGGGTGYCGGCGAAGGGTGGTTGCGMGGSCAACGATCATCATCGGCAGAAAGCGAAGCATATATGGAAGAAGCACGTTTGGGTGGTTCTGCTTCTTGATTTGTCCGTTTGCATGGTTTTGTTCGTGATTTGGTTATGGGTTTGCAGCGGATTTAAGTGCATGACCTATTGA 816 0.5551 MVTDPELIKYVCIARATTVLAHRRATTADPDVECLASKCIALAPPKHSLFTQTLKRRSYTFLIDPPFVFFAIFDHRLIKPFQLRFLHRLRDSSSAFLRSQPPTKDDDFVAFXFQSQFDSIFGETLXFESGGTDAAPVSRSPXVESPSTAANKIGRSPSTVPLLGKPQEGMLLKKKKRVVEAVKGEVKDGXGSPENKVDVCSDEXNGGGGTRDFSLGVXAKGGCXXNDHHRQKAKHIWKKHVWVVLLLDLSVCMVLFVIWLWVCSGFKCMTY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2480 271 PANTHER PHYTOLONGIN PHYL2.2 1 270 - -
Amo17g2480 271 MobiDBLite consensus disorder prediction 132 159 - -
Amo17g2480 271 PANTHER PHYTOLONGIN PHYL1.2 1 270 IPR044783 GO:0016021
Amo17g2480 271 MobiDBLite consensus disorder prediction 141 155 - -
Amo17g2480 271 Gene3D Longin domain 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2480 Amo-Chr17 122175792 122176607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2480 10 268 Miscellaneous Gene Families AT3G54300 20.833 1.16e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2480 - - ahf:112704940 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2480 17 122175792 122176607 Amo17g2480 17 122175792 122176607 ECH
Amo08g0434 08 8363799 8365484 Amo17g2480 17 122175792 122176607 hybridization