Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2478 ATGGGTGAGAGTAGAATGGAGGAGATGACGCTGCCAGGGTTGTTCGAGAAAGCTCGCAAGATCCACGCCACCGTGACGGAGTCCGGTGGCGCCGACGATGAGACGGTGAGGAAGGGTTGCGAGGCACTCGAGAAGTGCGAGGAGATGGTTAGCAAGCTGGGATTGTTCTCCCCAAACGAGACCAAAGACGATATCTCCACAAACAATCTCAAGTATCTTCTCGTGCCATTTTATCTTGCTGAGCTGACTGAAAGAATAACGCAGGATGATAGGTTACAGGTTATAAAGGCTTCACAGGCAAAGCTTAAGGAATTCATTTCCTTTTGTGAGGCAATGGAGCTGGTRCCAAAAGAGGAGCTAGAATTTTATTCGCAAGGGGTGCCAAAATCTGTTGCTGATCAGAGGGCCAGGAAGATTGCTAGATTTAAGCGCCAGAGAGCTGCAGAGTCAAAGTTGCTGGAAATAAAAGAGCGAAAAGAACGGCGGGGGCGTTCTACTAGAGCAGCTGCACTTTCGACCCCTGTTGAGGCAGGAGAGGAAGAAGTATTGGATGATGATGGGGAAGAAGAAAGGGAGGCTTGGAATACTACCATATCATTGGCGATTTGCAAGGCAATGGATCTGCTGGAAATGTTGAAGAAAGAGGAAGATATGCTGGTTGCTGTAAAGGATAAACAATCCAAGGATGGAGATACGGAGTTCTCTAGGGAAGCTCTCGATGAACGTGCCAAGAAAGCAGAAGCTTGGCATCGGGATGCTGCAGTTCGTGTACAGTACACTAAACCGGCACAGCCAATCACATGTGCCACTTTTGCTCAGGATGTTCTGGAAGGAAGAGCTAAGGCTTCACAGGCACATGAACACAAACATCAACCGCTAATATTTGGACCAGCCAGTCTTTTGAACGGAAGCGTAACAACCGAGAGGGAAAGAATGGCTGCTCAGGTCTTCCAACCTAGTCATAGGATGCCAACCATGAGCATTGAGGAAGCAGGTCTTAAGGAAATGGAAATAATGAATAAATGGCAAGAGCGAAATGCCAGACTCATGGAAGAAGCCAACTCATCCTGGTACAAAGATAACAGGCCAACAAGGCCAGGAGAAGACGAAGATGAAGATGACGATGCTGCCCAGGAGAAAGCGCGGGCATGGGACGATTGGAAGGATGATAATCCCAGGGGTGCGGGAAACAAGAAACTCACTCCATGCGGCTAA 1215 0.4848 MGESRMEEMTLPGLFEKARKIHATVTESGGADDETVRKGCEALEKCEEMVSKLGLFSPNETKDDISTNNLKYLLVPFYLAELTERITQDDRLQVIKASQAKLKEFISFCEAMELVPKEELEFYSQGVPKSVADQRARKIARFKRQRAAESKLLEIKERKERRGRSTRAAALSTPVEAGEEEVLDDDGEEEREAWNTTISLAICKAMDLLEMLKKEEDMLVAVKDKQSKDGDTEFSREALDERAKKAEAWHRDAAVRVQYTKPAQPITCATFAQDVLEGRAKASQAHEHKHQPLIFGPASLLNGSVTTERERMAAQVFQPSHRMPTMSIEEAGLKEMEIMNKWQERNARLMEEANSSWYKDNRPTRPGEDEDEDDDAAQEKARAWDDWKDDNPRGAGNKKLTPCG* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2478 404 MobiDBLite consensus disorder prediction 352 404 - -
Amo17g2478 404 Pfam TAP42-like family 11 392 IPR007304 GO:0009966
Amo17g2478 404 MobiDBLite consensus disorder prediction 377 395 - -
Amo17g2478 404 Gene3D - 10 232 IPR038511 -
Amo17g2478 404 MobiDBLite consensus disorder prediction 163 190 - -
Amo17g2478 404 PANTHER IMMUNOGLOBULIN-BINDING PROTEIN 1 1 404 IPR007304 GO:0009966
Amo17g2478 404 PANTHER PP2A REGULATORY SUBUNIT TAP46 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2478 Amo-Chr17 122159219 122163230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2478 K17606 - gmx:100807894 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2478 17 122159219 122163230 Amo17g2478 17 122159219 122163230 ECH