Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2456 ATGGCGGAACTGATAGGGCCTCGCTTGTACAGTTGCTGTAATTGTAGAAACCATGTGTCACTCCATGATGATATCATTTCTAAGGCTTTTCAGGGAAGAAACGGCCGAGCTTTTCTTTTTTCCCATGCCATGAATGTTGTCACAGGACCAAAAGAAGACAGGCATCTCATGACTGGCCTTCACACCGTTGCTGATGTTTATTGTGGTGATTGCCGTGAGGTCTTGGGTTGGAAGTATGAAAAAGCTTACGAAGCATCCCAGAAGTACAAGGAAGGAAAATTCATACTCGAGAAATCAAAAATAGTTAGGGAGAACTGGTAG 321 0.4361 MAELIGPRLYSCCNCRNHVSLHDDIISKAFQGRNGRAFLFSHAMNVVTGPKEDRHLMTGLHTVADVYCGDCREVLGWKYEKAYEASQKYKEGKFILEKSKIVRENW* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2456 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 101 IPR004910 -
Amo17g2456 106 PANTHER PROTEIN YIPPEE-LIKE 1 106 - -
Amo17g2456 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Amo17g2456 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2456 Amo-Chr17 121780558 121782923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2456 - - gmx:100800980 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2456 17 121780558 121782923 Amo17g2456 17 121780558 121782923 ECH
Amo08g0422 08 8172808 8175050 Amo17g2456 17 121780558 121782923 hybridization