Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2448 ATGGAGACTTTACCTCCCGAAATCTGTCTCAAGGTATTCTGTTTCCTGGATCACCACCATCTTGCTCTTGCTCAATTAGTGTGCAGGAAGTGGAAGTTCATCGCCTCCGACAACGATCTATGGTCTAATCTTTTTAAGGAAAGATGGGGAGGAAATCATGCTGCTTTCTATGCTCCAATCGGTTCAAAATCTTGGAAGGATGTATATGAGGTTCAAGACCGCTGCGATCGAGTTGGAGTGGGTTTGAAGATTATTAGAGAAGGTAGCGACTACTATCTTGTTCACCAAGGTGAGATCCAGCGACATCTGGGTTCAAGAAAGAATCAAGAACATGTTAATGGACGCAGCAGCCACACTTTTTGTTCAGAAAATGACTTCATTGGAGAAGGTTCTCTGATTCAAGAGAGATCTCGCCGCGGAATTCTGGACAAGATCCTATTCTTCATTGGGGATTTGGAAGTTGCTTCTGCTGGTGCAAAACGCAGGCGTCCACTCTGA 498 0.4478 METLPPEICLKVFCFLDHHHLALAQLVCRKWKFIASDNDLWSNLFKERWGGNHAAFYAPIGSKSWKDVYEVQDRCDRVGVGLKIIREGSDYYLVHQGEIQRHLGSRKNQEHVNGRSSHTFCSENDFIGEGSLIQERSRRGILDKILFFIGDLEVASAGAKRRRPL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2448 165 SUPERFAMILY F-box domain 2 74 IPR036047 GO:0005515
Amo17g2448 165 Gene3D - 1 78 - -
Amo17g2448 165 Pfam F-box-like 2 45 IPR001810 GO:0005515
Amo17g2448 165 SMART fbox_2 4 44 IPR001810 GO:0005515
Amo17g2448 165 ProSiteProfiles F-box domain profile. 1 44 IPR001810 GO:0005515
Amo17g2448 165 PANTHER F-BOX ONLY PROTEIN 48-RELATED 1 163 IPR045118 GO:0019005|GO:0031146
Amo17g2448 165 PANTHER OS02G0686500 PROTEIN 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2448 Amo-Chr17 121645826 121647283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2448 - - gmx:100500296 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2448 17 121645826 121647283 Amo17g2448 17 121645826 121647283 ECH
Amo08g0407 08 7862237 7863830 Amo17g2448 17 121645826 121647283 hybridization