Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2447 ATGGAGGTGTTCTACTACATGGTCTTTGGTGTATTGGCCGCGGTGGTGGCGGCACTGGAGCTGAGCAAGAGCAACAAGGACAGAATCAACACATCTTCCGCCTTCAATTCCTTCAAGAACAATTACCTTATCGTCTATTCCCTCATGATGGCTGGAGATTGGTTGCAAGGTCCATATGTGTACTACCTTTACAGTACATATGGCTACGGGAAAGGAGAGATAGGACAGCTTTTCATTGCTGGTTTTGGGTCTTCCATGCTCTTTGGAACAATTGTGGGATCTCTAGCTGACAAACAGGGGCGTAAGAGGGCCTGTGTGACCTATTGCATAACCTACATCCTGAGTTGCATCACCAAGCATTCTCCACAATACAAAGTACTCATGTTGGGCCGTGTTTTGGGAGGTATTGCCACTTCACTTCTGTTTTCAGCATTTGAATCGTGGCTTGTTGCTGAGCACAACAAGAGGGGCTTTGATCAACAGTGGCTATCATTGACGTTTTCAAAAGCTATATTTCTTGGAAACGGTCTTGTTGCTATTGTCTCTGGGCTGTTTGGAAATGTTCTTGTTGATACGTTGTCTCTTGGACCTGTCGCTCCCTTTGATGCTGCTTCATGTTTTCTTGCAATTGGTATGGCCATCATCTTATCTACGTGGACTGAAAATTTTGGGGATCCTTCTGAGAACAAGGACTTGCTTACCCAATTCAGGGGTGCTGCTGTGGCCATTGCATCAGATGAAAAAATTGCCTTGTTGGGTGCCATACAATCTCTCTTTGAAGGTTCAATGTATACCTTTGTATTCCTATGGACTCCTGCATTGAGCCCAAACGATGAAGAAATTCCACATGGTTTTATTTTTGCAACATTCATGTTATCTTCAATGTTGGGAAGCTCACTGGCATCTAGGTTGATGGCTCGCGCATCACTCCGAGTAGAGGGCTACATGCAGATTGTTTTTGCAGTTTCTGCTGCTTCTCTAATACTTCCCATTTTGACCACTTTCGTTGTGTCTCCTACAAAGGAGAAAGGTGGAGGCATCTCATTTTCTGGTTCCATTCAGCTTCTTGGCTTCTGTACTTTCGAGAGTTGTGTTGGCATATTCTGGCCATCTATTATGAAGATGAGATCTCAATATATTCCGGAGGAGGCTAGGAGCACAATCATGAACTTCTTCCGCATTCCTCTGAACATTTTTGTGTGTGTTGTGCTGTACAACGTTGATGCATTCCCTATCACTGTGATGTTTGGCATGTGCTCAATTTTCCTGATGGTTGCCTGTATCTTACAAAGGCGACTGATGGTCATTGCAGAAAAGCCAAAAGCAGGAGAATGGCAAATGAAGGAAAGGGACACTGAATCAGAGCCATTGAACATCTAA 1380 0.442 MEVFYYMVFGVLAAVVAALELSKSNKDRINTSSAFNSFKNNYLIVYSLMMAGDWLQGPYVYYLYSTYGYGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMLGRVLGGIATSLLFSAFESWLVAEHNKRGFDQQWLSLTFSKAIFLGNGLVAIVSGLFGNVLVDTLSLGPVAPFDAASCFLAIGMAIILSTWTENFGDPSENKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLSSMLGSSLASRLMARASLRVEGYMQIVFAVSAASLILPILTTFVVSPTKEKGGGISFSGSIQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLMVACILQRRLMVIAEKPKAGEWQMKERDTESEPLNI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2447 459 Pfam Sugar-tranasporters, 12 TM 4 358 IPR008509 GO:0015098|GO:0015689|GO:0016021
Amo17g2447 459 SUPERFAMILY MFS general substrate transporter 43 439 IPR036259 -
Amo17g2447 459 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 1 459 IPR008509 GO:0015098|GO:0015689|GO:0016021
Amo17g2447 459 Gene3D MFS general substrate transporter like domains 42 431 IPR036259 -
Amo17g2447 459 PANTHER MOLYBDATE-ANION TRANSPORTER 1 459 - -
Amo17g2447 459 CDD MFS_MFSD5_like 35 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2447 Amo-Chr17 121640742 121644786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2447 K24175 - gmx:100799378 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2447 17 121640742 121644786 Amo17g2447 17 121640742 121644786 ECH
Amo08g0406 08 7857273 7861325 Amo17g2447 17 121640742 121644786 hybridization