Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2402 ATGGCTTATTCATCACTGTCATTATCCAAAACGGCACCGCATGTTCCCCACCTCACAAACCCTATCTCCTCCTCCTTCTACCACTTCCATTCCCCTTCCCTCTTTCTCTCTTTCCCATTCTACCCTCGCCTCTCCCCCCTCAGAGCAGCTGCAACTTCCGACGGCGACCACTTCCTCAGGAAGCCCCTCGTTCCCCAACCCAACACCAGCTATGGTTACGACCGCGGCGATGATGATGATGATGAAGAAGAGGAGGAGGAGGAGGAGGAGGATAAATGCGTTGACTGGGAAGACCAGATTCTGGAGGACACCGTTCCTTTGGTTGGCTTTGTCAGGATGCTTCTCCATTCTGGACAATATGAAAGTGGAGATAGACTGAGTCCAGAGCATGAGAAAACCATTCTTGAGAAGCTGCTTCCCTTTCATCCAGAATATGAGAAAAAGATTGGAGTTGGAGTTGATTATATCACGATTGGATATCATCCCAATTTTGAGCGATCTAGGTGTTTGTTCATAGCACGGAAAGATGGAGAGCTGGTTGACTTTTCATATTGGAAGTGCATAAAGGGTTTGATCAGAAAAAATTATCCATTATATGCAGACAGTTTCATTCTCAGACATTTCAGGAAGCGCAGCAGCCATCAGTTGCGAAGTTAG 657 0.4703 MAYSSLSLSKTAPHVPHLTNPISSSFYHFHSPSLFLSFPFYPRLSPLRAAATSDGDHFLRKPLVPQPNTSYGYDRGDDDDDEEEEEEEEEDKCVDWEDQILEDTVPLVGFVRMLLHSGQYESGDRLSPEHEKTILEKLLPFHPEYEKKIGVGVDYITIGYHPNFERSRCLFIARKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRSSHQLRS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2402 218 Coils Coil 79 99 - -
Amo17g2402 218 MobiDBLite consensus disorder prediction 75 93 - -
Amo17g2402 218 Pfam Protein of unknown function (DUF3223) 113 188 - -
Amo17g2402 218 PANTHER - 21 213 IPR044673 -
Amo17g2402 218 MobiDBLite consensus disorder prediction 58 93 - -
Amo17g2402 218 Gene3D - 102 191 - -
Amo17g2402 218 PANTHER PROTEIN DCL HOMOLOG, CHLOROPLASTIC 21 213 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2402 - - gmx:100306718 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2402 17 119957541 119960638 Amo17g2402 17 119957541 119960638 ECH
Amo08g0836 08 14536540 14540494 Amo17g2402 17 119957541 119960638 hybridization