Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2400 ATGCCGGCATTCTTATCCACCGCGAAGGCACTCCGCTCCTTAGCGTCATGCAGAAGCGGCGTCGCTCAATTGATTAGGAGGAGCAGCAGCCACAAATTCGAAGGCTGCCGGTGTCTTACCTCCATCGCTGGCGGCGCCACCAATCAGATTCAGTCCCTTGGATGCCACATTGGCGGTTCCCCGTTTACGGGAGCGTTGAGTAACAGCAATGCTGCTCTCCAAACGAGACACTTCCTTGGATGTGGAGATGGTGAAGAAGGTGTTCTCTCCAAAATTTACGAGGAGAAGCGCGTTTTGGGGTATTCGGCAGAGCAATTATTTGATGTTGTTGCAGCTGTTGAATTCTACCATGGGTTCGTTCCCTGGTGTCAAAGGTCGGAGATACTTAGGCACTATCCAGATGGATCATTTGATGCTGAGTTGGAGATTGGATTTAAATTTCTTGTTGAAAGTTATGTTTCTCACGTTGAATTGGATAGACCAAAACGTATAAAGACAACCGTTTCTCAGAGTACCCTGTTTGATCATTTGATAAATATATGGGAATTCAATCCAGGCCCAGTTCCAGGGACGTGCAATCTTTATTTTTTGGTGGATTTCAAGTTTCAGTCACCACTTTACAGACAGATTGCATCTATGTTCTTCAAGGAGGTAGCCTCTAGGATGGTTGGTTCATTTACGGAGCGTTGCCGTTTGATATATGGACCAGAGGTGCGGGTCCATGAAAGGTCATATGGAGAAAGGGCATAA 750 0.4667 MPAFLSTAKALRSLASCRSGVAQLIRRSSSHKFEGCRCLTSIAGGATNQIQSLGCHIGGSPFTGALSNSNAALQTRHFLGCGDGEEGVLSKIYEEKRVLGYSAEQLFDVVAAVEFYHGFVPWCQRSEILRHYPDGSFDAELEIGFKFLVESYVSHVELDRPKRIKTTVSQSTLFDHLINIWEFNPGPVPGTCNLYFLVDFKFQSPLYRQIASMFFKEVASRMVGSFTERCRLIYGPEVRVHERSYGERA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2400 249 CDD COQ10p_like 93 231 IPR044996 GO:0006744|GO:0045333|GO:0048039
Amo17g2400 249 PANTHER SPERM PROTEIN HOMOLOG 1 243 IPR044996 GO:0006744|GO:0045333|GO:0048039
Amo17g2400 249 Pfam Polyketide cyclase / dehydrase and lipid transport 100 226 IPR005031 -
Amo17g2400 249 Gene3D - 91 235 IPR023393 -
Amo17g2400 249 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED 1 243 - -
Amo17g2400 249 SUPERFAMILY Bet v1-like 93 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2400 Amo-Chr17 119924703 119927231 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2400 K18588 - gmx:100778674 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2400 17 119924703 119927231 Amo17g2400 17 119924703 119927231 ECH