Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2394 ATGGGTGCCAATCACAGCCGTGATGAGCTTCTAGATTCTTCCGACGAGGAAGAAGAAGAAGTAAACTACGAAGACGCCACTGAAGGAGGAGGTGGAGACTCGAGCTCAGAGCGCAGAATCAAAAGCCCATCATCGCTCGATGAGGTTGAGGCAAAGCTCAAAGCCCTCAAGCTCAAGTACTCATCAGCCACCCCCAACGCCGTCAAGCTCTACCTCCACGTCGGCGGTAACACCCCACAAGCCAAATGGGTAACTGCCGACAAACTCACATCTTACTCTTTCGTTAGGGCCCGGCGACTCGGAGAAGAACAAGACGAAGAGGAAGAAGACGACGAGGATGACGATGAGCAGGAAGGCGGAGAGTCATGGTGGTTCTTGAAGGTTGGTTCGAAGATCCGATCCAAGGTGGGTTTGGAGATGCAGTTGAAAGCCTTCGCCAGCCAGCGGCGCGTGGACTTCGTTTCACGCGCCGTCTGGGCCATGAAGTTCTTCACGGAGCAAGACTACAATACATTCATCACGCGCTTCCAGGATTGCATGTTTGAAAACACGCACGGCGTTGAGGCCACAGAGCAGAACAAGCTCAAAGTGTACGGCAAGGATTTCATCGGTTGGGCGAATCCCGATGCCGCCGACGATTCCATGTGGGAAGACGCAGAGGACGCGTTCGCCAAGAGCCCCGCCTCCGCCACTCCGGTTAGGGCTACTCAGGATTTGAGGGAAGAGTTCGAAGAAGCCGCGAATGGCGGGATTCAGAGCTTGGCGTTGGGGGCATTGGACAATAGCTTCTTGGTTGGCGATACCGGAATCCAGGTGGTGAAGAATTTCGCTCATGGAATCCATGGGAAGGGTGCTTTTGTGCATTTCGGACAAGGATACCAAAGGGATAGGGTTTGTGCTTCTTCTTTGGAGCATTGCACTCCGAAGAAGACGCTCCTGATGAAGGCGGAGACAAACATGCTTCTCATGAGTCCAGTGGGCGGTGGAAAGCTTCACTCCACCGGGCTTCATCAGCTTGATATCGAGACTGGGAAGGTTGTGACTGAGTGGAAGTTTGGTAAAGATGGCACTGATATCACAATGAGGGACATCACTAATGATAGTAAAGGTGCTCAATTGGATCCTACAGGTTCAACTTTTCTAGGTTTGGATGATAACAGGCTTTGTAGGTGGGACATGCGCGATCGCAATGGGATTGTTCAGAACATTGCTGATGCTAGCACCCCAGTGTTGAATTGGGCGCAGGGCCACCAGTTTTCAAGAGGGACTAATTTCCAGTGCTTTGCTACCACTGGTGATGGTTCCATTGTTGTTGGGTCTCTGGATGGGAAGATTCGCCTCTATTCGATCAACTCTATGAGGCAGGCCAAGACGGCTTTTCCTGGCCTCGGTTCGCCTATTACTCATGTTGATGTTACCTACGATGGGAAGTGGATTGTGGGCACAACGGATACATATTTGATTGTCATTTGTGCTGTGTTTACTGATAAGGATGGAAAGACAAAAACTGGTTTTTCTGGTCGCATGGGGAATAAGATTGCTGCTCCTAGGTTGTTGAAGCTGAATCCTCTGGATTCTCATTCAGCTGGAACCAATAACAAGTTCCGCAATGCTCAGTTTTCGTGGGTGACTGAAAATGGGAAGCAGGAGCGCCATGTAGTAGCCACAGTGGGGAAATTCAGTGTGATATGGAATTTCCAACAAGTCAAGGATGGTTCTCATGTGTGCTACGAGAATCAACAGGGTCTAAAGAGTTGTTACTGCTACAAGATAGTCCTCAGGGATGATTCCATTGTTGATAGCCGATTTATGCATGACAAGTTTGCAGTTACTGATTCTCCTGAGGCTCCATTGGTGATTGCTACCCCAATGAAAGTTAGCTCTTTCAGCATATCCAGCAAGCGATGA 1908 0.4995 MGANHSRDELLDSSDEEEEEVNYEDATEGGGGDSSSERRIKSPSSLDEVEAKLKALKLKYSSATPNAVKLYLHVGGNTPQAKWVTADKLTSYSFVRARRLGEEQDEEEEDDEDDDEQEGGESWWFLKVGSKIRSKVGLEMQLKAFASQRRVDFVSRAVWAMKFFTEQDYNTFITRFQDCMFENTHGVEATEQNKLKVYGKDFIGWANPDAADDSMWEDAEDAFAKSPASATPVRATQDLREEFEEAANGGIQSLALGALDNSFLVGDTGIQVVKNFAHGIHGKGAFVHFGQGYQRDRVCASSLEHCTPKKTLLMKAETNMLLMSPVGGGKLHSTGLHQLDIETGKVVTEWKFGKDGTDITMRDITNDSKGAQLDPTGSTFLGLDDNRLCRWDMRDRNGIVQNIADASTPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSINSMRQAKTAFPGLGSPITHVDVTYDGKWIVGTTDTYLIVICAVFTDKDGKTKTGFSGRMGNKIAAPRLLKLNPLDSHSAGTNNKFRNAQFSWVTENGKQERHVVATVGKFSVIWNFQQVKDGSHVCYENQQGLKSCYCYKIVLRDDSIVDSRFMHDKFAVTDSPEAPLVIATPMKVSSFSISSKR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2394 635 SUPERFAMILY Putative isomerase YbhE 330 507 - -
Amo17g2394 635 MobiDBLite consensus disorder prediction 104 119 - -
Amo17g2394 635 MobiDBLite consensus disorder prediction 31 45 - -
Amo17g2394 635 Gene3D - 315 578 IPR015943 GO:0005515
Amo17g2394 635 Pfam VID27 C-terminal WD40-like domain 298 578 IPR013863 -
Amo17g2394 635 MobiDBLite consensus disorder prediction 100 119 - -
Amo17g2394 635 PANTHER DEM PROTEIN 1 635 - -
Amo17g2394 635 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 635 IPR040458 -
Amo17g2394 635 MobiDBLite consensus disorder prediction 12 26 - -
Amo17g2394 635 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2394 Amo-Chr17 119845866 119848893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2394 48 635 Acyl Lipid Metabolism Gene Families AT3G19240 67.785 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2394 - - gmx:100810233 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2394 17 119845866 119848893 Amo17g2394 17 119845866 119848893 ECH