Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2381 ATGCTCAAGATTCTTCAGGATGACTATCGGCTTGTTAAGGATTGTATATCTGGTTACATTTATGATTCCAGTCCGGTTGATTTTACCAGTGATTTGGGTGTTCGATTTCTTCTACAACCAACTGTTTTGAAAGTTTCCCATCCACCAAGATTTGCTTTGTGGGTTGCAAATAGCATAGCATCTGGTCTTGATTCTCTTTTCCTTAGCAGATTTGAAGCGCAGCGTGCAGAGTATTGGCGTACTCTATATTCAACCACTAGTATGAAGGTCCCATATCTCATTTTGTGTTCAGAAAATGATGATCTTGCTCCAGTTCAAGTTATTTCAAATTTTGCCGATAAACTTAAATACTTTGGAGGAGATGTCAAATTGTTAAAATGGAGTAATTCTCCTCATGTAGGTCATTATCGGCATCATCCAGTGGATTACAAGGCTGCTATTTCTGAGATCCTTGGCAAGGCAGTTGCAATTTACCGTCGCAAAAATCAACGAATTGAAGATGAGGTCCTAGGCATAGAGGGAACTAGAGATGAGATCACAGATCCATTCTCTGAATTGAGGAAAGCAGCAGTGACCTCAACTAGTTTTCAGGGTTTTGCTGTTTCTCCAAGTGATAATCTGTCACCCGTTTCAATGGAGTACTACGATGGTAAAGATGTGGGCTCCATACCTGATGAACGGAAGGAAGGTTTTATTCATCTGCCAAGCCATGCAAGCATCAATGCGCATGGTGTTCTTAGCCAAATACTGTTTGATGTTTGTGTTCCAAGGAACGTTGACGATTGGGATATCAGAATGAAGAAGATACTGGTGACAGGCGCATCTGGTTACCTCGGCGGGAGGCTCTGTTCTGCCCTCCTTCGACAAGGTTACTCCGTTAGGGTCCTCGTTAGGCCTACCAGCGACCTCTCCGCAATTCCCACACCTTCCGAAACTTTCTACGGCGACATCACCGACTACGCGTCCCTCCTCCCCGCATTCGCCGGTTGCTCCGTTGTCTTCCACGTCGCCGCTCTCGTCGAGCCCTGGCTTCCCGATCCCTCCAAATTCTTCTCCGTTAACGTTGGAGGATTGAAGAATGTTTTAAGGGCGTTGAAGGAGACCAAGACAGTGGAGAAACTCATATATACGTCGTCGTTTTTCGCTCTTGGACCCACTGATGGAGCCATTGCCGATGAGAATCAGGTGCATCATGAGAAATTTTTCTGCACGGAATATGAGAAATCAAAGCTTGCAGCGGACAAGATTGCGAAGGAAGCTGCATCAGAGGGTGCACCAATGGTCCTCCTTTATCCAGGGGTAATCTACGGTCCTGGCAAGGTCACGGCAGGGAATGTTCTTGCACGAATGATAATAGAACGCTTTAATTGGAGACTACCTGGTTACATAGGCAAGGGAAACGATGGATTTTCGTTCAGCCATGTTGATGATGTTGTTGAAGGGCACATTGCGGCAATGGAAAAAGGAAAACCTGGGAGTAGATACCTACTAACGGGTGAGAATGCATCATTCAAACATGTTTTTGATCTGGCTGCTGCCATAACAGATACTAGGAAGCCAATACTTAGCATCCCTTTGTGGATGATTGAAGCATATGGCTGGCTCATGGTTTTGTTCTCTAGGATCACTGGAAAGCATCCCCTCATCAGTCCACCCACTGTGCATGTTTTAAGACACAAGTGGGAGTATTCGTGCGCGAAAGCTGAGGAGGAGCTAGACTATAGGCCTAGAAGCCTGAAAGAAGGACTTGCTGAGGTGCTACTCTGGTTGAAGAATGAGTGCTTTATAACATATTAG 1797 0.4535 MLKILQDDYRLVKDCISGYIYDSSPVDFTSDLGVRFLLQPTVLKVSHPPRFALWVANSIASGLDSLFLSRFEAQRAEYWRTLYSTTSMKVPYLILCSENDDLAPVQVISNFADKLKYFGGDVKLLKWSNSPHVGHYRHHPVDYKAAISEILGKAVAIYRRKNQRIEDEVLGIEGTRDEITDPFSELRKAAVTSTSFQGFAVSPSDNLSPVSMEYYDGKDVGSIPDERKEGFIHLPSHASINAHGVLSQILFDVCVPRNVDDWDIRMKKILVTGASGYLGGRLCSALLRQGYSVRVLVRPTSDLSAIPTPSETFYGDITDYASLLPAFAGCSVVFHVAALVEPWLPDPSKFFSVNVGGLKNVLRALKETKTVEKLIYTSSFFALGPTDGAIADENQVHHEKFFCTEYEKSKLAADKIAKEAASEGAPMVLLYPGVIYGPGKVTAGNVLARMIIERFNWRLPGYIGKGNDGFSFSHVDDVVEGHIAAMEKGKPGSRYLLTGENASFKHVFDLAAAITDTRKPILSIPLWMIEAYGWLMVLFSRITGKHPLISPPTVHVLRHKWEYSCAKAEEELDYRPRSLKEGLAEVLLWLKNECFITY* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2381 598 Pfam NAD dependent epimerase/dehydratase family 269 495 IPR001509 -
Amo17g2381 598 Gene3D alpha/beta hydrolase 40 161 IPR029058 -
Amo17g2381 598 Gene3D - 258 596 - -
Amo17g2381 598 Pfam Eukaryotic protein of unknown function (DUF829) 16 262 IPR008547 -
Amo17g2381 598 SUPERFAMILY alpha/beta-Hydrolases 17 151 IPR029058 -
Amo17g2381 598 CDD AR_FR_like_1_SDR_e 269 590 - -
Amo17g2381 598 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 269 598 - -
Amo17g2381 598 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 269 598 - -
Amo17g2381 598 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 263 591 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2381 Amo-Chr17 119705746 119722583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2381 267 499 Miscellaneous Gene Families AT1G09510 32.432 1.40e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2381 K15891 - cic:CICLE_v10003480mg 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2381 17 119705746 119722583 Amo17g2381 17 119705746 119722583 ECH