Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2379 ATGCTTACACCTAGCTACCCATCCATATCATGCAATCTCTTTGCCGGAAGAGAAGAAATGGACACGAGAAGGAGGACGAGATTAGAGCCTAAGAAAGCTCAGACAGGAGCACATGATGATGATGATGATCATAGAGCAGAGATGCGGGAAAGTTTGGCACAAGGAAAAGGCAGAGCAAGCAGAGACGGAAGGACACGAAGCAAGGAGAGAAAATTGGCCTTGCAACAAGACGTGGAGAGGTTGAAGAAGAAGCTTAGGAACGAAGAGAACATCCACAGGGCATTGCAGAGAGCTTTCAACAGACCCTTGGGTGCTCTCCCTCGTCTTCCTCCTTATCTCCCTCCCAATACCCTGGGACTTCTTGCGGAGGTGGCGGTGCTGGAGGAAGAAATTGCAAGGCTTGAAGAGCAGGTGATGCATTTCAGGCAGGACTTGTATCAAGAAGCTGTATATACATCATCCTCCAAGATGAAAATGGATCATTCATCTCGTTTAGTTAAATTGAAGTCTCCTTCCCCAACAATTACACTTCCCGAGGATAGGCAAGGAAAAGAGAACCAGTCATGTAGTCATTCTCACAAGAACACCAAGCAGTTCAATTCTAAAACTAAAACAACAAAAACTCCTATTAATACACTTCCCCTCCACAACAAACCATGGCATCGTCCAAAGAGACAGCAAGAACTAAGAGTGAATGACCAGCCAATGGCAGAACCAACAGATCATGAAGAAAGTCCAAACATAATCTCTGAAAATATTCTCAAGTGCTTATCAAGCATTCTTTTGAGAATGAGTACTGYCAAGTATCCGGATTCTACAGCTGGCATGTTGCGAGATCCGAAATCTCGAAACTGTACTMAAGRAACATGGTTTCAGGATCCATATGGTACWTGTTTAGAATTTGGAGAGATGGATATTGGTCCGTACAAGCAATTCCGTGCAATTGAAGCTGAATCCTTCAGTCCAAAACGAACTGCTAATTCTTTGTTTCTGCAGCATCGGTTGAAGCTTCTTTTGAGGAAACTTTCCTCTGTCAACTTAGAGAATCTCAATCATCAGGAGAAGCTTGCATTCTGGATCAACATATATAACTCTTGTATGATGAATGCATTCAATGAGCATGGCTTACCGGAGAGTCCGGAAACAGTTGTTGCATTGATGCACAAGGCAACAATAAATGTGGGTGGACACTTGCTAAGCGCAACAACGATAGAGCATTGCATTCTAAGGCTTCCTTATCATTGGAAATTGACATCAAAGGGAGCCAAGAATCATGAAATGACAGTAAGAAGCATATATGGATTGGAATTATCAGAACCCTTGGTGACATTTGCTCTCTCATGTGGAACTTGGTCCTCTCCTGCTGTCAGAGTTTACACAGCATCACAGGTCGAGAACCAACTCGAAGCAGCAAAAAGAGAATACTTGCAGGCTGCAGTTGGAATTTCAACTTCAAAGTTTGCTATCCCAAAGCTGCTAGATTGGTACTTACTGGACTTTGCAAAAGACTTGGAATCTTTGCTGGATTGGATATGCCTCCAATTACCAAGCGAAATAGGGAAAGAAGCCATTAAGTTCCTCGAGAATAGAAAAACCGAACCCCTCTCACAATTTGTACAAATTATGCCATATGAGTTTAGTTTTAGATACTTGCTATGCACATAA 1665 0.4264 MLTPSYPSISCNLFAGREEMDTRRRTRLEPKKAQTGAHDDDDDHRAEMRESLAQGKGRASRDGRTRSKERKLALQQDVERLKKKLRNEENIHRALQRAFNRPLGALPRLPPYLPPNTLGLLAEVAVLEEEIARLEEQVMHFRQDLYQEAVYTSSSKMKMDHSSRLVKLKSPSPTITLPEDRQGKENQSCSHSHKNTKQFNSKTKTTKTPINTLPLHNKPWHRPKRQQELRVNDQPMAEPTDHEESPNIISENILKCLSSILLRMSTXKYPDSTAGMLRDPKSRNCTXXTWFQDPYGTCLEFGEMDIGPYKQFRAIEAESFSPKRTANSLFLQHRLKLLLRKLSSVNLENLNHQEKLAFWINIYNSCMMNAFNEHGLPESPETVVALMHKATINVGGHLLSATTIEHCILRLPYHWKLTSKGAKNHEMTVRSIYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENQLEAAKREYLQAAVGISTSKFAIPKLLDWYLLDFAKDLESLLDWICLQLPSEIGKEAIKFLENRKTEPLSQFVQIMPYEFSFRYLLCT* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2379 554 Pfam Protein of unknown function, DUF547 348 476 IPR006869 -
Amo17g2379 554 Coils Coil 117 144 - -
Amo17g2379 554 MobiDBLite consensus disorder prediction 170 245 - -
Amo17g2379 554 MobiDBLite consensus disorder prediction 17 68 - -
Amo17g2379 554 PANTHER EXPRESSED PROTEIN 172 553 - -
Amo17g2379 554 PANTHER EXPRESSED PROTEIN 17 165 - -
Amo17g2379 554 Pfam Leucine-zipper of ternary complex factor MIP1 67 148 IPR025757 -
Amo17g2379 554 MobiDBLite consensus disorder prediction 192 213 - -
Amo17g2379 554 PANTHER TRANSCRIPTION FACTOR 17 165 - -
Amo17g2379 554 MobiDBLite consensus disorder prediction 221 240 - -
Amo17g2379 554 Coils Coil 64 98 - -
Amo17g2379 554 PANTHER TRANSCRIPTION FACTOR 172 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2379 Amo-Chr17 119680126 119684720 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2379 - - adu:107460342 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2379 17 119680126 119684720 Amo17g2379 17 119680126 119684720 ECH