Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2355 ATGACGCTATTTCACTTCTTTAACTGCGCGATTCTCACCTTCGGCCCCCACGCCGTCTACTATTCCGCCACCCCCTTATCTGAGTATGATACACTCGGCACCTCTATCAAAGCCGCYGTAGTTTATTTAGCAACTGCATTGGTTAAGCTCATTTGTCTGGCTACTTTTCTCAAGGTATCTGAAAGCGATAGCTTCGATCCATATCAGGAATTATTGAAGGCTTTAATAGGTTTCATAGATGTTGCGGGACTTTATTTTGCCTTGGCCCAGTTGACTCACAGGAACATCTCTCAGAATCATAAATTCCAAGCAGTTGGACTTGGTTGGGCATTTGCTGATTCTGTTCTACATAGATTGGCACCTCTTTGGGTGGGTGCTAGAGGATTAGAATTTACTTGGGATTACATTCTTCAGGGCCTGGAGGCTAATGCAAATTTGGTGTTGAGCATATCCCTTGCTGCACTGGGATCTTTAATGTGGCTACGTAAAAATAAACCCAAGACCCTCATTCCCATAATATACGTATGTGCAGGAATTGTAGCAACCATGCCATCAATCACAAGCTATCTGAGGCGTGGATTGGGATGGCACTTTCCAAAAATCGTAGGTTTTGAACTCTTCACATCGTTGGTGATGGCGTTTATAAGTTGGCAACTGTTTTCAGCTTGTCAAAGACCTTCACTGTGA 687 0.4367 MTLFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKAAVVYLATALVKLICLATFLKVSESDSFDPYQELLKALIGFIDVAGLYFALAQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYVCAGIVATMPSITSYLRRGLGWHFPKIVGFELFTSLVMAFISWQLFSACQRPSL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2355 228 PANTHER BNAA08G03740D PROTEIN 1 228 - -
Amo17g2355 228 PANTHER SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN 1 228 IPR019164 -
Amo17g2355 228 Pfam Predicted membrane protein (DUF2053) 2 161 IPR019164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2355 Amo-Chr17 118933714 118937056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2355 - - ahf:112764772 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2355 17 118933714 118937056 Amo17g2355 17 118933714 118937056 ECH
Amo08g0375 08 7277866 7280918 Amo17g2355 17 118933714 118937056 hybridization