Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2294 ATGTACAACAACAACAGCGTATCGATCCCTATCTCCGACCACGAATCCGACGAACATGGTGGCGTGCGGGTTCACACGCGACGGAAGCGTAAGATAGTGATTCACAGAGGAAACCACGACTTCAGAGAAAAAGTGTTGAGGAAGTTACTTAGACACTGGATCCTAATCATCATTCTTTTAGCTTCGGCTTTGTTTGTGTTCGAGGCCTTCACCATTGGTCGCAAACCTGATTCCACTGTCACCTCAGAGCTACGAACTCCAAATAAAAATGGTGGAATAAAGTCAATAAACTCGCAACTTGCATTGGGAAAGGAACCCCAACATGACAACTTGAATCGGCTCGATCCACCGCGTTGCTTGAAGCTTCTGCCAGTTGAAGAACTTGAACACCTTGATATTCCTGTGACAGAAGAGTCTAATGGCCCTGTTAACCAGGTTCTATATGTTTCAGAGGGAGAGTCTTCTTTGGTAGGACGGAATGCTACCTTTTCTCTTGCGAGATTTAATTTGTTTACTGGAAATCAAACATTAGAGCAGAGAGATACAAGTTTTGAGATTAAGGAATCTATGATGGTACATTGTGGTTTCTACAGTTTAAATGGAGGGTTTAAGATATCTGATGAAGATAAAACTTATATGCATGCTTGCAAAGTTGTGGTTTCTACTTGTGCATTTGGTGGTGGAGATGATCTCTATCAACCTATTGGGATGTCAGAGGCCTCACTTAAGAAGGTCTGCTACGTAGCATTCTGGGATGAAATCACCTTAAGAGCACAGGAATTGGCAGACCACCGAATTGGAGAAAATGGATTTATAGGGAAATGGAGAGTTGTGATTGTGAGGGATCTTCCTTTTGTTGATCAAAGGCTGAACGGCAAAATTCCCAAGATGTTAAGCCACCGCCTATTTCCTCAAGCAAAATWCTCTATCTGGGTAGACTCAAAGTCCCAATTTAGGAGGGACCCACTAGGTGTGTTGGAGGCACTTCTTTGGCACCCACATTCAGTATTTGCCATATCTGAACATGGAGCTCGCAGTAGTGTCTACGATGAGGCTAAGGCTGTAGTCAAGAAAAATAAAGCCAAGCCAGAGGAAGTTGAAGTGCAGTTGAACCAATACCGCAAGGATGGGTTGCCTGAAGWCAAAAGATTTAKTGGAAAGAAAGCTCTGTGTGAAGCCTCTGTTATCGTGAGGAAGCATATGCCACTAACTAATCTTCTGATGTGCCTCTGGTTTAATGAGGTGGTTCGATTCACTTCTAGGGATCAACTCAGCTTCCCATATGTCTTATGGCGGCTTAATGCTTTCAAATACATCAATACATTCCCTGTCTGCACCCGCAAGGATTTAGTCAACAGCATGGGCCACATCCGCAAGGCCAAGCCTTTGCAATTACAAAGATAG 1404 0.4359 MYNNNSVSIPISDHESDEHGGVRVHTRRKRKIVIHRGNHDFREKVLRKLLRHWILIIILLASALFVFEAFTIGRKPDSTVTSELRTPNKNGGIKSINSQLALGKEPQHDNLNRLDPPRCLKLLPVEELEHLDIPVTEESNGPVNQVLYVSEGESSLVGRNATFSLARFNLFTGNQTLEQRDTSFEIKESMMVHCGFYSLNGGFKISDEDKTYMHACKVVVSTCAFGGGDDLYQPIGMSEASLKKVCYVAFWDEITLRAQELADHRIGENGFIGKWRVVIVRDLPFVDQRLNGKIPKMLSHRLFPQAKXSIWVDSKSQFRRDPLGVLEALLWHPHSVFAISEHGARSSVYDEAKAVVKKNKAKPEEVEVQLNQYRKDGLPEXKRFXGKKALCEASVIVRKHMPLTNLLMCLWFNEVVRFTSRDQLSFPYVLWRLNAFKYINTFPVCTRKDLVNSMGHIRKAKPLQLQR* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2294 467 Pfam Protein of unknown function (DUF616) 166 456 IPR006852 -
Amo17g2294 467 PANTHER ALKALINE CERAMIDASE-RELATED 3 464 IPR006852 -
Amo17g2294 467 PANTHER OS01G0749100 PROTEIN 3 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2294 Amo-Chr17 116688783 116691549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2294 - - gmx:100812230 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2294 17 116688783 116691549 Amo17g2294 17 116688783 116691549 ECH