Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2280 ATGGGATTTCCCATTATGGAGACCCTCAAATTCTGGTTACAAGACCATCCCTCCATTGTATCCTTCAGGTGGAGCCCGGCACTCTCGTGGGGCTCCACCTGGTTCTTTCTTATCTCCGCCATCTCTTTCTATGTCACCGCCGCTGTCACTCTCCACCTTATTCTCAGATTCTTGGGCCGGCGACGTCCGGTCCCACTAGGCCCCATCCCGGCCATACACAACCTTGCCATGTCCCTCACTTCCCTTACCATATTCACCGGCATGCTCCTCTCCGCGAAAGCGGAACTGAGGGACACGCGGTGGTTGTGGAGACGCACAAGAACCACTCCGTTCGAGTGGTTCTTGTGCTTCCCCCTTGGGATCCGCCCCTCCGGCCGCGTCTTCTTCTGGTCCTATGCCTTCTACCTCTCTCGGTTCCTCCACATGCTGCGAACATTCTTCATCGTTCTCCGGCACCGGAAGCTCTCGTTCTTCAGGCTGTTCAATCACTCGATTCTTCTGGTGATGTCATTCCTGTGGCTAGAATTCACACAGTCCTTTCAGGTTCTGGCGATCCTGTTTTCCACGGCGGTTAACACAGCGGTGTACGGGTACCGGTTGTGGGTTGAAATAGGGTTGCCGGTGAGGAACTTCTGGTTCACGGTGGATTGCCAGATGGTGCTTCTATGCTGCAATTTGGTGTGCCATTTTGGAGTGCTTCTGTTGCATTATCTGAGAGGAGGGTGCAATGGGATTGGAGCTTGGCTTTTCAATTCTCTTTTGAATGTTGCAATTCTTATGCTGTTCTTGAGATCTTATGTCAATGAGTTTTGGCGGAGGAACCTTAATAATCCAACTTCTTATTCTTCTTCCAAGGACTACTCGCCTAAGCATGCAAAACTTAATGGTAGTTATGCAAAGTTAAATTAA 909 0.5061 MGFPIMETLKFWLQDHPSIVSFRWSPALSWGSTWFFLISAISFYVTAAVTLHLILRFLGRRRPVPLGPIPAIHNLAMSLTSLTIFTGMLLSAKAELRDTRWLWRRTRTTPFEWFLCFPLGIRPSGRVFFWSYAFYLSRFLHMLRTFFIVLRHRKLSFFRLFNHSILLVMSFLWLEFTQSFQVLAILFSTAVNTAVYGYRLWVEIGLPVRNFWFTVDCQMVLLCCNLVCHFGVLLLHYLRGGCNGIGAWLFNSLLNVAILMLFLRSYVNEFWRRNLNNPTSYSSSKDYSPKHAKLNGSYAKLN* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2280 302 Pfam GNS1/SUR4 family 32 274 IPR002076 GO:0009922|GO:0016021
Amo17g2280 302 PANTHER F25A4.4 6 278 - -
Amo17g2280 302 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 6 278 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2280 Amo-Chr17 116508321 116509570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2280 6 268 Acyl Lipid Metabolism Gene Families AT1G75000 61.940 1.50e-111 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2280 - - qsu:112011994 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2280 17 116508321 116509570 Amo17g2280 17 116508321 116509570 ECH