Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2274 ATGCTTGAAGCAATGGAAGGTTCCATGAATGGAGGCGTCCCGCAGTTACAGAGCTATGGAGATAGCAGCGAGGAGGAGCTCTCGGTGCTTCCTCGTCACACGAAAGTGGTGGTTACCGGAAATAACCGCACGAAATCGGTGCTCGTTGGTCTCCAAGGCGTGGTCAAGAAGGCCGTTGGACTAGGCGGTTGGCATTGGCTGGTTCTTACAAATGGCATTGAAGTGAAGCTACAGCGGAATGCTCTTAGTGTGATTGAAGCACCCACTGGCAATGAGGAAGATAATGACCTTGAATTTGAAAACTTATCCTGGAATGGATCAGATATGGCATCCGACGACAGACGTAAGTCCCATAAATCGAGGCACAGAATGCATAGATCATTGGGATCATCACATAAGACTATGAGTAGGTCCTTGTCTGGTGATTCACTGTCTAAGGGTTCTTCTGCTTCTACGCCGAATGGGTCCACGAAGGTTTATTTAAGTAAGCTGGAGATGGCTGCATTGTGGAGATATTGGCGACATTTTAATCTGGTGGATGCCGTCCCAAACCCATCAAAAGAGCAGCTGGTAGACGTTGTTCAGAGGCATTTCATGTCACAGCAAATGGACGAGTTGCAGGTCATTGTGGGATTTGTTCAAGCTGCAAAGAGGCTCAAGACTGTGTGCGATTGA 675 0.48 MLEAMEGSMNGGVPQLQSYGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDNDLEFENLSWNGSDMASDDRRKSHKSRHRMHRSLGSSHKTMSRSLSGDSLSKGSSASTPNGSTKVYLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVCD* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2274 224 MobiDBLite consensus disorder prediction 131 156 - -
Amo17g2274 224 MobiDBLite consensus disorder prediction 1 25 - -
Amo17g2274 224 MobiDBLite consensus disorder prediction 101 156 - -
Amo17g2274 224 Gene3D - 139 224 IPR038291 -
Amo17g2274 224 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
Amo17g2274 224 MobiDBLite consensus disorder prediction 116 130 - -
Amo17g2274 224 PANTHER SAP30 1 223 IPR024145 -
Amo17g2274 224 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 217 IPR025718 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2274 Amo-Chr17 116282178 116286827 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2274 - - gmx:100809195 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2274 17 116282178 116286827 Amo17g2274 17 116282178 116286827 ECH