Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2269 ATGCCTATGGCCACAAAGCCAACTCAGTCACGTGCTAATCCCAAACCTGCTTCCTCAGAAGTAGCGAGAGCCGTTCTGAAACCGGGTGGGAACAGAGTTGTTGCAGTAGCTGAACACCCCACCAAAGTGAAGATAACGAAGAAGAAGCCGCCGCCATCACCACCCAAGGACGAGGAGGTGGTGGCACCGCCAAAAATTGAAGAGTCGGTTGTCCGAGGTAACGTGTCAGTGGACAGCACGTGCTCCTCGGATTCCTCCTTGTCTGGTTCGAGCAATAAAAACAACAGCAACAAAAACAATAGTGTAGTAAAGAGGAAGAGGAGAGTGAATAATGCCACCTTTATTTCTCAATCCCCCAAGCCCTCATCAGGACCGCCCAAGAGGTGTGACTGGATCACTCCAAATGCTGACCCTCGGTATACTGCTTTCCATGATGAAGAATGGGGTGTTCCAGTTATTGATGATAAAAAGCTATTTGAGCTTTTAGTCTTTTCACAAGCATTAGCAGAATATAGCTGGCCAGCTATTCTTAACCAAAGACACATATTTAGGAAGCTTTTTGAAAATTTTGAACCATCATCAGTTTCAGAGTTTACTGATAAGAAGTTGCTAACACTGAAAATAAACGGCAGCTCATTGTTATCAGAACCAAAGCTCCGCGCTATTGTGGAAAATGCCAAGCAAATACTTAAGGTTGTGAAAGAGTTTGGTTCATTCAGCAATTATTGCTGGAGATTCGTTAACCACAAACCACTTAGGAATGAATATCGATATGGACTTCAAGTTCCTGCGAAGACCCCAAAAGCAGAGGTCATAAGCAAGGACATGATGCGCAGAGGTTTCCAATGCGTGGGACCCACCGTGGTTTATTCGTTCATGCAGGTAGCAGGACTCGTTAATGATCACCTAATTACATGTTTCAGGTACCAGCAATGCAGGGTCACAACAACCACAAACGAACTCAAAARTGTCGTTAAAGATATTAATTAA 990 0.4424 MPMATKPTQSRANPKPASSEVARAVLKPGGNRVVAVAEHPTKVKITKKKPPPSPPKDEEVVAPPKIEESVVRGNVSVDSTCSSDSSLSGSSNKNNSNKNNSVVKRKRRVNNATFISQSPKPSSGPPKRCDWITPNADPRYTAFHDEEWGVPVIDDKKLFELLVFSQALAEYSWPAILNQRHIFRKLFENFEPSSVSEFTDKKLLTLKINGSSLLSEPKLRAIVENAKQILKVVKEFGSFSNYCWRFVNHKPLRNEYRYGLQVPAKTPKAEVISKDMMRRGFQCVGPTVVYSFMQVAGLVNDHLITCFRYQQCRVTTTTNELKXVVKDIN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2269 329 MobiDBLite consensus disorder prediction 1 131 - -
Amo17g2269 329 PANTHER DNA GLYCOSYLASE SUPERFAMILY PROTEIN 14 320 - -
Amo17g2269 329 MobiDBLite consensus disorder prediction 41 65 - -
Amo17g2269 329 MobiDBLite consensus disorder prediction 106 123 - -
Amo17g2269 329 MobiDBLite consensus disorder prediction 1 16 - -
Amo17g2269 329 Gene3D Hypothetical protein; domain 2 127 310 - -
Amo17g2269 329 MobiDBLite consensus disorder prediction 73 99 - -
Amo17g2269 329 Pfam Methyladenine glycosylase 135 308 IPR005019 GO:0006284|GO:0008725
Amo17g2269 329 PANTHER OS04G0501200 PROTEIN 14 320 - -
Amo17g2269 329 SUPERFAMILY DNA-glycosylase 127 312 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2269 Amo-Chr17 116111519 116114680 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2269 K01246 - gmx:100306457 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2269 17 116111519 116114680 Amo17g2269 17 116111519 116114680 ECH